C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymopoietin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019961 Tmpo 10090 - 10:91147571-91171582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020123 Tmpo-201 91160417-91171582 protein_coding
  ENSMUST00000072239 Tmpo-202 91147571-91171582 protein_coding
  ENSMUST00000092219 Tmpo-203 91147571-91171582 protein_coding
  ENSMUST00000099355 Tmpo-204 91147571-91171582 protein_coding
  ENSMUST00000105293 Tmpo-205 91147571-91171582 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020123ENSMUST00000072239ENSMUST00000092219ENSMUST00000099355ENSMUST00000105293
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020123 5.088±2.56 4.893±0.23 5.441±0.89 6.461±4.22 4.376±0.98 5.120±0.56 2.226±0.20 5.360±0.99 10.489±9.29 8.929±0.71 2.238±0.46 8.772±1.49 5.855±2.52 4.408±0.10
ENSMUST00000072239 5.581±2.95 N/A 8.016±0.57 11.565±6.93 4.298±0.00 4.383±1.02 1.079±0.00 2.566±0.84 25.323±25.18 8.681±2.01 1.856±0.20 15.623±4.79 13.794±7.12 2.322±0.92
ENSMUST00000092219 N/A N/A 2.623±0.00 13.966±4.09 3.362±0.00 4.058±0.00 2.051±0.29 2.247±0.41 1.777±0.57 N/A 4.339±1.08 11.689±0.00 N/A 1.329±0.00
ENSMUST00000099355 N/A N/A N/A N/A N/A 4.928±0.00 1.447±0.15 N/A N/A N/A 4.679±1.20 N/A N/A N/A
ENSMUST00000105293 N/A 43.458±8.32 N/A 4.997±2.73 4.840±0.76 9.035±0.48 1.964±0.00 2.409±0.25 2.292±0.63 6.901±0.00 N/A 27.002±10.23 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0002 VISTA 10:90885612-91488565
CIL_0003XT CIL_0003XT_0002 CGP 10:91116574-91171582

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 ISO chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0005635 IDA nuclear envelope
GO:0005637 IEA nuclear inner membrane
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007315 tmpoa thymopoietin a protein_coding Danio_rerio
ENSDARG00000022978 tmpob thymopoietin b protein_coding Danio_rerio
ENSG00000120802 TMPO thymopoietin protein_coding Homo_sapiens

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