C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymopoietin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020123 Tmpo-201 ENSMUSG00000019961 10090 - 10:91160417-91171582 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020123
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020123 5.088±2.56 4.893±0.23 5.441±0.89 6.461±4.22 4.376±0.98 5.120±0.56 2.226±0.20 5.360±0.99 10.489±9.29 8.929±0.71 2.238±0.46 8.772±1.49 5.855±2.52 4.408±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0002 VISTA 10:90885612-91488565
CIL_0003XT CIL_0003XT_0002 CGP 10:91116574-91171582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 ISO chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0005635 IDA nuclear envelope
GO:0005637 IEA nuclear inner membrane
GO:0006355 IDA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261210 TMPO-006 protein_coding Homo_sapiens 0 682
ENST00000266732 TMPO-001 protein_coding Homo_sapiens 0 1988
ENST00000343315 TMPO-014 protein_coding Homo_sapiens 0 691
ENST00000393053 TMPO-005 protein_coding Homo_sapiens 0 691
ENST00000546828 TMPO-013 processed_transcript Homo_sapiens 0 466
ENST00000547214 TMPO-007 processed_transcript Homo_sapiens 0 361
ENST00000549938 TMPO-009 processed_transcript Homo_sapiens 0 556
ENST00000552831 TMPO-008 retained_intron Homo_sapiens 0 359
ENST00000556029 TMPO-002 protein_coding Homo_sapiens 0 691
ENST00000556678 TMPO-015 protein_coding Homo_sapiens 0 357
ENST00000575258 TMPOP2-001 processed_pseudogene Homo_sapiens 0 294

Loading