C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aldehyde dehydrogenase 1 family, member L2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020256 Aldh1l2 10090 - 10:83487450-83534140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020497 Aldh1l2-001 83487450-83534140 protein_coding
  ENSMUST00000125193 Aldh1l2-006 83503992-83513720 processed_transcript
  ENSMUST00000138858 Aldh1l2-003 83494742-83534081 retained_intron
  ENSMUST00000141184 Aldh1l2-004 83494740-83497502 processed_transcript
  ENSMUST00000143793 Aldh1l2-005 83499829-83508120 processed_transcript
  ENSMUST00000146640 Aldh1l2-002 83489429-83533395 protein_coding
  ENSMUST00000147381 Aldh1l2-007 83493337-83496017 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020497ENSMUST00000125193ENSMUST00000138858ENSMUST00000141184ENSMUST00000146640
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020497 0.940±0.65 0.240±0.10 1.043±0.05 7.186±0.95 0.424±0.15 0.521±0.16 1.396±0.28 0.423±0.20 0.320±0.55 0.315±0.05 0.801±0.08 0.544±0.19 0.394±0.21 N/A
ENSMUST00000125193 N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A 0.411±0.00
ENSMUST00000138858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.01
ENSMUST00000141184 N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.01 N/A N/A N/A N/A N/A
ENSMUST00000146640 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RN CIL_0005RN_0002 CGP 10:83360221-83534140
CIL_0004GA CIL_0004GA_0002 CGP 10:83487450-83596469

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006730 IEA one-carbon metabolic process
GO:0008168 IEA methyltransferase activity
GO:0009058 IEA biosynthetic process
GO:0009258 IEA 10-formyltetrahydrofolate catabolic process
GO:0016155 IEA formyltetrahydrofolate dehydrogenase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0032259 IEA methylation
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070230 aldh1l2 aldehyde dehydrogenase 1 family, member L2 protein_coding Danio_rerio
ENSG00000136010 ALDH1L2 aldehyde dehydrogenase 1 family, member L2 protein_coding Homo_sapiens

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