C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aldehyde dehydrogenase 1 family, member L2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136010 ALDH1L2 9606 - 12:105019784-105084577 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258494 ALDH1L2-001 105019790-105084577 protein_coding
  ENST00000548418 ALDH1L2-005 105030070-105031935 protein_coding
  ENST00000549335 ALDH1L2-003 105019784-105066605 retained_intron
  ENST00000552270 ALDH1L2-002 105024424-105084458 nonsense_mediated_decay
  ENST00000552427 ALDH1L2-004 105070520-105084444 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258494ENST00000549335ENST00000552270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258494 0.850±0.00 1.030±0.00 0.067±0.00 0.548±0.00 0.518±0.15 0.279±0.00 0.362±0.19 0.263±0.00 0.366±0.31 0.318±0.08 0.250±0.11 0.160±0.05 0.141±0.00 0.481±0.00
ENST00000549335 N/A N/A N/A 0.132±0.04 N/A 0.444±0.00 N/A N/A N/A 0.177±0.00 N/A 0.279±0.08 0.210±0.00 0.760±0.50
ENST00000552270 N/A N/A 0.028±0.00 N/A N/A N/A 0.139±0.00 N/A N/A N/A 0.100±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GE CIL_0004GE_0001 CGP 12:104802553-105049737
CIL_0005RN CIL_0005RN_0001 CGP 12:104986310-105084577
CIL_0004GA CIL_0004GA_0001 CGP 12:105019784-105169134

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006730 IEA one-carbon metabolic process
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0009058 IEA biosynthetic process
GO:0009258 IEA 10-formyltetrahydrofolate catabolic process
GO:0016155 IEA formyltetrahydrofolate dehydrogenase activity
GO:0016491 IEA oxidoreductase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0032259 IEA methylation
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070230 aldh1l2 aldehyde dehydrogenase 1 family, member L2 protein_coding Danio_rerio
ENSMUSG00000020256 Aldh1l2 aldehyde dehydrogenase 1 family, member L2 protein_coding Mus_musculus

Loading