C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuron specific gene family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020537 Nsg2-001 ENSMUSG00000020297 10090 + 11:32000463-32059202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020537 1.282±1.20 12.141±2.45 1.293±0.16 273.311±116.66 6.443±3.22 4.564±0.52 0.480±0.06 1.683±0.50 0.200±0.39 1.068±0.06 0.185±0.27 0.975±0.59 0.133±0.14 0.041±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344
CIL_0006YY CIL_0006YY_0002 CGP 11:31965592-32059202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0007212 IEA dopamine receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0032051 IEA clathrin light chain binding
GO:0048268 IEA clathrin coat assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303177 HMP19-001 protein_coding Homo_sapiens 0 1109
ENST00000519717 HMP19-012 protein_coding Homo_sapiens 0 704
ENST00000519867 HMP19-010 protein_coding Homo_sapiens 0 586
ENST00000521146 HMP19-007 processed_transcript Homo_sapiens 0 684
ENST00000521278 HMP19-011 protein_coding Homo_sapiens 0 647
ENST00000521959 HMP19-006 processed_transcript Homo_sapiens 0 809

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