C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein A/B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020358 Hnrnpab 10090 - 11:51600100-51606847 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074669 Hnrnpab-001 51600100-51606847 protein_coding
  ENSMUST00000101249 Hnrnpab-002 51600869-51606847 protein_coding
  ENSMUST00000109103 Hnrnpab-003 51601174-51606847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074669ENSMUST00000101249ENSMUST00000109103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074669 32.506±13.95 N/A 49.749±2.81 85.828±54.68 16.286±2.13 36.793±2.12 17.514±1.45 24.400±4.51 53.869±37.94 40.515±2.03 22.446±1.34 54.892±16.47 52.811±20.75 18.324±3.93
ENSMUST00000101249 N/A N/A N/A N/A 14.964±0.47 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109103 77.751±46.71 379.422±73.79 65.510±10.16 153.180±19.22 197.186±122.48 205.355±103.36 25.424±4.24 60.727±40.42 121.807±76.77 153.532±43.32 29.426±1.45 412.635±208.33 307.389±378.45 90.682±82.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0000166 IEA nucleotide binding
GO:0001837 IDA epithelial to mesenchymal transition
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003723 IPI RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0019013 IEA viral nucleocapsid
GO:0030529 ISS ribonucleoprotein complex
GO:0043565 IDA sequence-specific DNA binding
GO:0044822 IEA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007960 hnrnpaba heterogeneous nuclear ribonucleoprotein A/Ba protein_coding Danio_rerio
ENSDARG00000017568 hnrnpabb heterogeneous nuclear ribonucleoprotein A/Bb protein_coding Danio_rerio
ENSG00000197451 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B protein_coding Homo_sapiens

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