C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calnexin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020637 Canx-001 ENSMUSG00000020368 10090 - 11:50294467-50325673 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020637 43.912±11.10 40.082±5.19 77.481±7.56 38.403±13.46 36.318±4.20 41.210±7.08 49.572±4.61 76.697±6.19 75.944±10.12 57.396±2.45 12.500±2.27 65.759±14.36 118.274±52.04 36.143±4.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F2 CIL_0004F2_0002 CGP 11:50255634-50325673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0048488 IMP synaptic vesicle endocytosis
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane
GO:0072583 IMP clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247461 CANX-001 protein_coding Homo_sapiens 0 2636
ENST00000452673 CANX-005 protein_coding Homo_sapiens 0 2479
ENST00000502296 CANX-006 protein_coding Homo_sapiens 0 481
ENST00000502498 CANX-007 protein_coding Homo_sapiens 0 643
ENST00000502673 CANX-003 protein_coding Homo_sapiens 0 1037
ENST00000503126 CANX-016 processed_transcript Homo_sapiens 0 422
ENST00000504579 CANX-020 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000504734 CANX-002 protein_coding Homo_sapiens 0 2477
ENST00000505090 CANX-012 retained_intron Homo_sapiens 0 281
ENST00000506298 CANX-015 retained_intron Homo_sapiens 0 492
ENST00000506654 CANX-017 protein_coding Homo_sapiens 0 641
ENST00000507307 CANX-008 protein_coding Homo_sapiens 1e-29 134
ENST00000508787 CANX-014 protein_coding Homo_sapiens 0 505
ENST00000509563 CANX-010 protein_coding Homo_sapiens 2e-28 130
ENST00000510810 CANX-018 protein_coding Homo_sapiens 0 584
ENST00000513246 CANX-009 protein_coding Homo_sapiens 0 370
ENST00000514032 CANX-004 nonsense_mediated_decay Homo_sapiens 0 1899
ENST00000514383 CANX-021 protein_coding Homo_sapiens 0 527

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