C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POZ (BTB) and AT hook containing zinc finger 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020453 Patz1 10090 + 11:3288874-3309083 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057089 Patz1-001 3290439-3309083 protein_coding
  ENSMUST00000093402 Patz1-012 3290457-3309083 protein_coding
  ENSMUST00000094471 Patz1-003 3289993-3295429 protein_coding
  ENSMUST00000101644 Patz1-005 3289167-3309083 processed_transcript
  ENSMUST00000110043 Patz1-002 3289993-3309083 protein_coding
  ENSMUST00000123983 Patz1-010 3291459-3308142 processed_transcript
  ENSMUST00000134089 Patz1-004 3289281-3309083 protein_coding
  ENSMUST00000136285 Patz1-008 3292868-3294895 processed_transcript
  ENSMUST00000142561 Patz1-011 3288874-3290192 processed_transcript
  ENSMUST00000144396 Patz1-006 3289202-3295089 processed_transcript
  ENSMUST00000153603 Patz1-007 3292195-3294668 processed_transcript
  ENSMUST00000154319 Patz1-009 3298284-3307667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000057089ENSMUST00000093402ENSMUST00000094471ENSMUST00000101644ENSMUST00000110043ENSMUST00000142561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000057089 5.360±3.03 5.803±0.73 5.315±0.12 22.813±6.81 6.694±1.62 2.826±0.58 3.213±0.40 5.043±1.58 2.143±1.46 5.741±1.22 N/A 15.454±3.61 2.094±0.46
ENSMUST00000093402 N/A N/A N/A 2.989±0.00 4.044±0.00 1.886±0.54 N/A 3.874±0.00 2.075±0.96 4.536±0.81 N/A 8.584±1.45 1.528±0.69
ENSMUST00000094471 5.189±3.02 8.163±0.00 7.351±0.47 13.248±4.13 5.592±1.48 2.564±1.02 3.740±0.57 6.067±1.83 4.062±1.94 7.179±1.81 4.954±0.16 13.962±1.36 2.917±0.68
ENSMUST00000101644 N/A N/A N/A N/A 5.027±0.00 N/A N/A N/A N/A N/A N/A 9.007±0.00 N/A
ENSMUST00000110043 N/A N/A N/A N/A N/A N/A N/A N/A 0.595±0.00 N/A N/A N/A N/A
ENSMUST00000142561 N/A 29.110±0.00 N/A N/A N/A 5.374±0.00 N/A N/A 1.428±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028V CIL_00028V_0002 CGP 11:3202392-3309083

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006355 IPI regulation of transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0008584 IMP male gonad development
GO:0010468 IDA regulation of gene expression
GO:0030217 IDA T cell differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076584 patz1 POZ (BTB) and AT hook containing zinc finger 1 protein_coding Danio_rerio
ENSG00000100105 PATZ1 POZ (BTB) and AT hook containing zinc finger 1 protein_coding Homo_sapiens

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