C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00028V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016177-ENSDARG00000076584 CGP 7955 6:40853436-40899184
GeneTranscriptPositionBiotype
ENSDARG00000016177 (eif4enif1)
eukaryotic translation initiation factor 4E nuclear import factor 1 		ENSDART00000002728 (eif4enif1-201) 40853536-40878529 protein_coding
ENSDART00000123022 (eif4enif1-202) 40856558-40878533 protein_coding
ENSDART00000133599 (eif4enif1-001) 40853436-40878535 protein_coding
ENSDART00000145153 (eif4enif1-002) 40853536-40878535 protein_coding
ENSDARG00000076584 (patz1)
POZ (BTB) and AT hook containing zinc finger 1 		ENSDART00000114974 (patz1-201) 40882895-40895018 protein_coding
ENSDART00000156660 (patz1-001) 40882091-40899184 protein_coding
ENSDARG00000080732 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000117074 (5S_rRNA.65-201) 40877221-40877339 rRNA
CIL_00028V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020454-ENSMUSG00000020453 CGP 10090 11:3202392-3309083
GeneTranscriptPositionBiotype
ENSMUSG00000020453 (Patz1)
POZ (BTB) and AT hook containing zinc finger 1 		ENSMUST00000057089 (Patz1-001) 3290439-3309083 protein_coding
ENSMUST00000093402 (Patz1-012) 3290457-3309083 protein_coding
ENSMUST00000094471 (Patz1-003) 3289993-3295429 protein_coding
ENSMUST00000101644 (Patz1-005) 3289167-3309083 processed_transcript
ENSMUST00000110043 (Patz1-002) 3289993-3309083 protein_coding
ENSMUST00000123983 (Patz1-010) 3291459-3308142 processed_transcript
ENSMUST00000134089 (Patz1-004) 3289281-3309083 protein_coding
ENSMUST00000136285 (Patz1-008) 3292868-3294895 processed_transcript
ENSMUST00000142561 (Patz1-011) 3288874-3290192 processed_transcript
ENSMUST00000144396 (Patz1-006) 3289202-3295089 processed_transcript
ENSMUST00000153603 (Patz1-007) 3292195-3294668 processed_transcript
ENSMUST00000154319 (Patz1-009) 3298284-3307667 protein_coding
ENSMUSG00000020454 (Eif4enif1)
eukaryotic translation initiation factor 4E nuclear import factor 1 		ENSMUST00000020734 (Eif4enif1-002) 3202392-3244581 protein_coding
ENSMUST00000110048 (Eif4enif1-001) 3203021-3244587 protein_coding
ENSMUST00000110049 (Eif4enif1-003) 3202663-3244588 protein_coding
ENSMUST00000120721 (Eif4enif1-012) 3203630-3244586 protein_coding
ENSMUST00000125224 (Eif4enif1-007) 3202663-3222331 retained_intron
ENSMUST00000125637 (Eif4enif1-004) 3202734-3220530 protein_coding
ENSMUST00000127950 (Eif4enif1-009) 3234219-3240975 retained_intron
ENSMUST00000131693 (Eif4enif1-011) 3202689-3213434 retained_intron
ENSMUST00000132425 (Eif4enif1-005) 3227767-3230149 retained_intron
ENSMUST00000135223 (Eif4enif1-010) 3227813-3239459 protein_coding
ENSMUST00000143770 (Eif4enif1-006) 3227767-3230186 retained_intron
ENSMUST00000147534 (Eif4enif1-008) 3235545-3239441 retained_intron
ENSMUST00000179770 (Eif4enif1-201) 3202995-3244585 protein_coding
ENSMUSG00000020457 (Drg1)
developmentally regulated GTP binding protein 1 		ENSMUST00000020741 (Drg1-001) 3249907-3266393 protein_coding
ENSMUST00000125424 (Drg1-002) 3257730-3266415 retained_intron
ENSMUST00000132159 (Drg1-005) 3259327-3266393 nonsense_mediated_decay
ENSMUST00000139430 (Drg1-004) 3250097-3252859 retained_intron
ENSMUST00000142605 (Drg1-003) 3254411-3262536 retained_intron
ENSMUST00000159304 (Drg1-006) 3187360-3252685 nonsense_mediated_decay
ENSMUST00000166162 (Drg1-007) 3256543-3266392 processed_transcript
ENSMUSG00000053263 (Gm12592)
predicted gene 12592 		ENSMUST00000155332 (Gm12592-001) 3305426-3331178 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028V_0001ENSDARG00000016177ENSDART00000002728ENSDART00000123022ENSDART00000133599ENSDART00000145153ENSDARG00000076584ENSDART00000114974ENSDART00000156660ENSDARG00000080732ENSDART00000117074CIL_00028V_0002ENSMUSG00000020453ENSMUST00000057089ENSMUST00000093402ENSMUST00000094471ENSMUST00000101644ENSMUST00000110043ENSMUST00000123983ENSMUST00000134089ENSMUST00000136285ENSMUST00000142561ENSMUST00000144396ENSMUST00000153603ENSMUST00000154319ENSMUSG00000020454ENSMUST00000020734ENSMUST00000110048ENSMUST00000110049ENSMUST00000120721ENSMUST00000125224ENSMUST00000125637ENSMUST00000127950ENSMUST00000131693ENSMUST00000132425ENSMUST00000135223ENSMUST00000143770ENSMUST00000147534ENSMUST00000179770ENSMUSG00000020457ENSMUST00000020741ENSMUST00000125424ENSMUST00000132159ENSMUST00000139430ENSMUST00000142605ENSMUST00000159304ENSMUST00000166162ENSMUSG00000053263ENSMUST00000155332
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028V_0001ENSDARG00000016177ENSDART00000002728ENSDART00000123022ENSDART00000133599ENSDART00000145153ENSDARG00000076584ENSDART00000114974ENSDART00000156660ENSDARG00000080732ENSDART00000117074CIL_00028V_0002ENSMUSG00000020453ENSMUST00000057089ENSMUST00000093402ENSMUST00000094471ENSMUST00000101644ENSMUST00000110043ENSMUST00000142561ENSMUSG00000020454ENSMUST00000020734ENSMUST00000110048ENSMUST00000110049ENSMUST00000120721ENSMUST00000179770ENSMUSG00000020457ENSMUST00000020741ENSMUST00000166162ENSMUSG00000053263ENSMUST00000155332
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016177 ENSDART00000002728 N/A N/A N/A 1.614±0.27 N/A N/A 3.165±0.00 4.541±0.58 0.404±0.00 N/A N/A N/A N/A N/A
ENSDART00000123022 N/A N/A N/A 1.590±0.00 N/A N/A 4.084±0.00 N/A 0.262±0.00 N/A 1.799±0.00 N/A N/A N/A
ENSDART00000133599 N/A N/A N/A 3.144±1.75 N/A N/A 3.237±0.00 6.936±0.00 N/A N/A 1.272±0.00 N/A N/A N/A
ENSDART00000145153 N/A N/A N/A 2.279±0.00 N/A N/A 2.862±0.00 N/A N/A N/A 1.667±0.00 N/A N/A N/A
ENSDARG00000076584 ENSDART00000114974 N/A N/A N/A N/A N/A N/A N/A N/A 0.626±0.00 N/A N/A N/A N/A N/A
ENSDART00000156660 N/A N/A N/A 3.023±1.54 N/A N/A 1.193±0.36 1.592±0.14 0.419±0.00 N/A 0.838±0.00 N/A N/A N/A
ENSDARG00000080732 ENSDART00000117074 N/A N/A N/A N/A N/A N/A 75.863±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020453 ENSMUST00000057089 5.360±3.03 5.803±0.73 5.315±0.12 22.813±6.81 6.694±1.62 2.826±0.58 3.213±0.40 5.043±1.58 2.143±1.46 5.741±1.22 N/A 15.454±3.61 2.094±0.46 N/A
ENSMUST00000093402 N/A N/A N/A 2.989±0.00 4.044±0.00 1.886±0.54 N/A 3.874±0.00 2.075±0.96 4.536±0.81 N/A 8.584±1.45 1.528±0.69 N/A
ENSMUST00000094471 5.189±3.02 8.163±0.00 7.351±0.47 13.248±4.13 5.592±1.48 2.564±1.02 3.740±0.57 6.067±1.83 4.062±1.94 7.179±1.81 4.954±0.16 13.962±1.36 2.917±0.68 N/A
ENSMUST00000101644 N/A N/A N/A N/A 5.027±0.00 N/A N/A N/A N/A N/A N/A 9.007±0.00 N/A N/A
ENSMUST00000110043 N/A N/A N/A N/A N/A N/A N/A N/A 0.595±0.00 N/A N/A N/A N/A N/A
ENSMUST00000123983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142561 N/A 29.110±0.00 N/A N/A N/A 5.374±0.00 N/A N/A 1.428±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020454 ENSMUST00000020734 4.553±2.25 3.704±0.00 9.517±1.76 5.925±0.36 3.381±1.17 1.924±0.00 2.177±0.28 2.702±0.49 8.995±5.46 5.394±0.80 1.572±0.56 6.802±1.86 7.083±3.94 3.550±0.88
ENSMUST00000110048 1.559±0.00 2.707±0.32 N/A N/A 3.393±0.85 3.136±0.66 N/A 1.872±0.00 1.820±0.55 2.019±0.00 N/A N/A 3.267±1.07 1.695±0.10
ENSMUST00000110049 4.143±1.78 N/A 12.388±2.09 12.242±6.46 2.135±0.08 N/A 2.701±0.79 1.876±0.11 7.764±6.88 2.649±0.17 5.767±1.44 8.967±2.97 10.844±5.27 3.865±0.44
ENSMUST00000120721 3.226±0.80 16.786±2.53 N/A N/A 9.511±5.34 7.156±3.00 2.696±0.00 2.418±0.00 2.236±0.19 8.895±2.65 N/A 20.238±5.24 N/A 5.255±0.00
ENSMUST00000125224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179770 N/A N/A N/A N/A N/A N/A N/A N/A 0.915±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000020457 ENSMUST00000020741 22.226±1.85 14.057±0.00 35.386±4.86 72.639±19.28 19.260±5.51 11.413±2.59 14.432±2.99 19.872±1.79 27.630±13.40 20.867±2.13 20.116±1.96 29.495±9.57 42.274±14.83 48.012±14.82
ENSMUST00000125424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 117.414±0.00 175.540±60.27 112.560±0.00
ENSMUSG00000053263 ENSMUST00000155332 N/A N/A N/A 2.919±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.968±0.39 N/A

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