C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POZ (BTB) and AT hook containing zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057089 Patz1-001 ENSMUSG00000020453 10090 + 11:3290439-3309083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000057089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000057089 5.360±3.03 5.803±0.73 5.315±0.12 22.813±6.81 6.694±1.62 2.826±0.58 3.213±0.40 5.043±1.58 2.143±1.46 5.741±1.22 15.454±3.61 2.094±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028V CIL_00028V_0002 CGP 11:3202392-3309083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006355 IPI regulation of transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0008584 IMP male gonad development
GO:0010468 IDA regulation of gene expression
GO:0030217 IDA T cell differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114974 patz1-201 protein_coding Danio_rerio 0 215
ENSDART00000156660 patz1-001 protein_coding Danio_rerio 0 215
ENST00000215919 PATZ1-003 protein_coding Homo_sapiens 0 1779
ENST00000266269 PATZ1-001 protein_coding Homo_sapiens 0 2041
ENST00000351933 PATZ1-004 protein_coding Homo_sapiens 0 2854
ENST00000405309 PATZ1-002 protein_coding Homo_sapiens 0 2041
ENST00000465287 PATZ1-005 retained_intron Homo_sapiens 2e-22 111
ENST00000494109 PATZ1-006 retained_intron Homo_sapiens 0 374

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