C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POZ (BTB) and AT hook containing zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094471 Patz1-003 ENSMUSG00000020453 10090 + 11:3289993-3295429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000094471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000094471 5.189±3.02 8.163±0.00 7.351±0.47 13.248±4.13 5.592±1.48 2.564±1.02 3.740±0.57 6.067±1.83 4.062±1.94 7.179±1.81 4.954±0.16 13.962±1.36 2.917±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028V CIL_00028V_0002 CGP 11:3202392-3309083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006355 IPI regulation of transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0008584 IMP male gonad development
GO:0010468 IDA regulation of gene expression
GO:0030217 IDA T cell differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114974 patz1-201 protein_coding Danio_rerio 0 215
ENSDART00000156660 patz1-001 protein_coding Danio_rerio 0 215
ENST00000215919 PATZ1-003 protein_coding Homo_sapiens 0 2176
ENST00000266269 PATZ1-001 protein_coding Homo_sapiens 0 2169
ENST00000351933 PATZ1-004 protein_coding Homo_sapiens 0 2169
ENST00000405309 PATZ1-002 protein_coding Homo_sapiens 0 2169
ENST00000465287 PATZ1-005 retained_intron Homo_sapiens 0 508
ENST00000494109 PATZ1-006 retained_intron Homo_sapiens 9e-23 111

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