C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 4E nuclear import factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020454 Eif4enif1 10090 + 11:3202392-3244588 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020734 Eif4enif1-002 3202392-3244581 protein_coding
  ENSMUST00000110048 Eif4enif1-001 3203021-3244587 protein_coding
  ENSMUST00000110049 Eif4enif1-003 3202663-3244588 protein_coding
  ENSMUST00000120721 Eif4enif1-012 3203630-3244586 protein_coding
  ENSMUST00000125224 Eif4enif1-007 3202663-3222331 retained_intron
  ENSMUST00000125637 Eif4enif1-004 3202734-3220530 protein_coding
  ENSMUST00000127950 Eif4enif1-009 3234219-3240975 retained_intron
  ENSMUST00000131693 Eif4enif1-011 3202689-3213434 retained_intron
  ENSMUST00000132425 Eif4enif1-005 3227767-3230149 retained_intron
  ENSMUST00000135223 Eif4enif1-010 3227813-3239459 protein_coding
  ENSMUST00000143770 Eif4enif1-006 3227767-3230186 retained_intron
  ENSMUST00000147534 Eif4enif1-008 3235545-3239441 retained_intron
  ENSMUST00000179770 Eif4enif1-201 3202995-3244585 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020734ENSMUST00000110048ENSMUST00000110049ENSMUST00000120721ENSMUST00000179770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020734 4.553±2.25 3.704±0.00 9.517±1.76 5.925±0.36 3.381±1.17 1.924±0.00 2.177±0.28 2.702±0.49 8.995±5.46 5.394±0.80 1.572±0.56 6.802±1.86 7.083±3.94 3.550±0.88
ENSMUST00000110048 1.559±0.00 2.707±0.32 N/A N/A 3.393±0.85 3.136±0.66 N/A 1.872±0.00 1.820±0.55 2.019±0.00 N/A N/A 3.267±1.07 1.695±0.10
ENSMUST00000110049 4.143±1.78 N/A 12.388±2.09 12.242±6.46 2.135±0.08 N/A 2.701±0.79 1.876±0.11 7.764±6.88 2.649±0.17 5.767±1.44 8.967±2.97 10.844±5.27 3.865±0.44
ENSMUST00000120721 3.226±0.80 16.786±2.53 N/A N/A 9.511±5.34 7.156±3.00 2.696±0.00 2.418±0.00 2.236±0.19 8.895±2.65 N/A 20.238±5.24 N/A 5.255±0.00
ENSMUST00000179770 N/A N/A N/A N/A N/A N/A N/A N/A 0.915±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NI CIL_0002NI_0002 CGP 11:3187360-3266415
CIL_00028V CIL_00028V_0002 CGP 11:3202392-3309083

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016177 eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 protein_coding Danio_rerio
ENSG00000184708 EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 protein_coding Homo_sapiens

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