C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4E nuclear import factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120721 Eif4enif1-012 ENSMUSG00000020454 10090 + 11:3203630-3244586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000120721
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000120721 3.226±0.80 16.786±2.53 9.511±5.34 7.156±3.00 2.696±0.00 2.418±0.00 2.236±0.19 8.895±2.65 20.238±5.24 5.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NI CIL_0002NI_0002 CGP 11:3187360-3266415
CIL_00028V CIL_00028V_0002 CGP 11:3202392-3309083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330125 EIF4ENIF1-002 protein_coding Homo_sapiens 0 1949
ENST00000344710 EIF4ENIF1-001 protein_coding Homo_sapiens 0 3168
ENST00000397518 EIF4ENIF1-009 protein_coding Homo_sapiens 0 233
ENST00000397520 EIF4ENIF1-008 protein_coding Homo_sapiens 0 233
ENST00000397523 EIF4ENIF1-005 protein_coding Homo_sapiens 0 1868
ENST00000397525 EIF4ENIF1-003 protein_coding Homo_sapiens 0 1949
ENST00000418321 EIF4ENIF1-012 protein_coding Homo_sapiens 0 339
ENST00000423097 EIF4ENIF1-006 protein_coding Homo_sapiens 0 364
ENST00000445424 EIF4ENIF1-007 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000495101 EIF4ENIF1-004 retained_intron Homo_sapiens 0 1938

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