C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4E nuclear import factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020734 Eif4enif1-002 ENSMUSG00000020454 10090 + 11:3202392-3244581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020734
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020734 4.553±2.25 3.704±0.00 9.517±1.76 5.925±0.36 3.381±1.17 1.924±0.00 2.177±0.28 2.702±0.49 8.995±5.46 5.394±0.80 1.572±0.56 6.802±1.86 7.083±3.94 3.550±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NI CIL_0002NI_0002 CGP 11:3187360-3266415
CIL_00028V CIL_00028V_0002 CGP 11:3202392-3309083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123022 eif4enif1-202 protein_coding Danio_rerio 0.00000000001 77
ENSDART00000133599 eif4enif1-001 protein_coding Danio_rerio 0.00000000001 77
ENST00000330125 EIF4ENIF1-002 protein_coding Homo_sapiens 0 1940
ENST00000344710 EIF4ENIF1-001 protein_coding Homo_sapiens 0 1855
ENST00000397518 EIF4ENIF1-009 protein_coding Homo_sapiens 0 233
ENST00000397520 EIF4ENIF1-008 protein_coding Homo_sapiens 0 233
ENST00000397523 EIF4ENIF1-005 protein_coding Homo_sapiens 0 3803
ENST00000397525 EIF4ENIF1-003 protein_coding Homo_sapiens 0 1940
ENST00000418321 EIF4ENIF1-012 protein_coding Homo_sapiens 0 387
ENST00000423097 EIF4ENIF1-006 protein_coding Homo_sapiens 0 719
ENST00000445424 EIF4ENIF1-007 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000495101 EIF4ENIF1-004 retained_intron Homo_sapiens 0 1855

Loading