C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1D magnesium-dependent, delta isoform
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020525 Ppm1d 10090 + 11:85311244-85347066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020835 Ppm1d-001 85311244-85347066 protein_coding
  ENSMUST00000127717 Ppm1d-002 85312164-85337203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020835ENSMUST00000127717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020835 4.460±1.45 6.288±0.95 4.029±0.10 5.744±2.59 4.754±1.12 3.690±0.38 1.803±0.05 3.901±0.34 5.582±5.18 4.824±0.35 1.708±0.22 6.405±1.39 10.443±4.52 53.508±16.61
ENSMUST00000127717 N/A N/A N/A 6.476±0.00 N/A N/A N/A N/A N/A N/A N/A 9.734±0.00 20.363±7.07 157.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000704 CIL_000704_0002 CGP 11:85187262-85347066
CIL_000569 CIL_000569_0003 CGP 11:85311244-85826058

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 IMP G2/M transition of mitotic cell cycle
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0004724 ISS magnesium-dependent protein serine/threonine phosphatase activity
GO:0005515 IEA protein binding
GO:0009617 IMP response to bacterium
GO:0016311 ISS dephosphorylation
GO:0035970 IEA peptidyl-threonine dephosphorylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009273 ppm1da protein phosphatase 1D magnesium-dependent, delta isoform a protein_coding Danio_rerio
ENSDARG00000021380 ppm1db protein phosphatase 1D magnesium-dependent, delta isoform b protein_coding Danio_rerio
ENSG00000170836 PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D protein_coding Homo_sapiens

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