C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1D magnesium-dependent, delta isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020835 Ppm1d-001 ENSMUSG00000020525 10090 + 11:85311244-85347066 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020835
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020835 4.460±1.45 6.288±0.95 4.029±0.10 5.744±2.59 4.754±1.12 3.690±0.38 1.803±0.05 3.901±0.34 5.582±5.18 4.824±0.35 1.708±0.22 6.405±1.39 10.443±4.52 53.508±16.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000704 CIL_000704_0002 CGP 11:85187262-85347066
CIL_000569 CIL_000569_0003 CGP 11:85311244-85826058

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 IMP G2/M transition of mitotic cell cycle
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0004724 ISS magnesium-dependent protein serine/threonine phosphatase activity
GO:0005515 IEA protein binding
GO:0009617 IMP response to bacterium
GO:0035970 IEA peptidyl-threonine dephosphorylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305921 PPM1D-001 protein_coding Homo_sapiens 0 2632
ENST00000392995 PPM1D-002 nonsense_mediated_decay Homo_sapiens 0 1565

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