C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hematological and neurological expressed sequence 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020737 Hn1 10090 - 11:115497353-115514387 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021083 Hn1-001 115497353-115514387 protein_coding
  ENSMUST00000139980 Hn1-004 115498032-115514148 processed_transcript
  ENSMUST00000142238 Hn1-005 115503033-115514116 processed_transcript
  ENSMUST00000145104 Hn1-003 115498131-115514348 processed_transcript
  ENSMUST00000155399 Hn1-002 115500382-115514371 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021083ENSMUST00000139980ENSMUST00000155399
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021083 69.844±3.83 35.167±14.33 43.658±5.53 393.902±264.32 94.202±21.58 207.536±38.17 42.582±7.48 28.130±0.94 65.886±60.85 66.209±1.48 19.079±2.43 92.799±32.94 52.722±31.52 116.334±52.83
ENSMUST00000139980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.786±2.17 183.265±25.93
ENSMUST00000155399 N/A 44.059±5.92 N/A N/A N/A N/A N/A N/A 5.317±0.00 N/A N/A N/A N/A 96.715±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0001JI CIL_0001JI_0002 CGP 11:115490420-115514387
CIL_0001HE CIL_0001HE_0002 CGP 11:115497353-115536276

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0032502 IEA developmental process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029419 hn1b hematological and neurological expressed 1b protein_coding Danio_rerio
ENSDARG00000054002 hn1a hematological and neurological expressed 1a protein_coding Danio_rerio
ENSG00000189159 HN1 hematological and neurological expressed 1 protein_coding Homo_sapiens

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