C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hematological and neurological expressed sequence 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021083 Hn1-001 ENSMUSG00000020737 10090 - 11:115497353-115514387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021083 69.844±3.83 35.167±14.33 43.658±5.53 393.902±264.32 94.202±21.58 207.536±38.17 42.582±7.48 28.130±0.94 65.886±60.85 66.209±1.48 19.079±2.43 92.799±32.94 52.722±31.52 116.334±52.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0001JI CIL_0001JI_0002 CGP 11:115490420-115514387
CIL_0001HE CIL_0001HE_0002 CGP 11:115497353-115536276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0032502 IEA developmental process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304834 HN1-003 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000356033 HN1-004 protein_coding Homo_sapiens 0 612
ENST00000409753 HN1-001 protein_coding Homo_sapiens 0 719
ENST00000470924 HN1-012 protein_coding Homo_sapiens 0 616
ENST00000476258 HN1-005 protein_coding Homo_sapiens 0 621
ENST00000482348 HN1-006 protein_coding Homo_sapiens 0 621

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