C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020867 Spata20 10090 - 11:94478904-94486179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041705 Spata20-001 94478904-94485348 protein_coding
  ENSMUST00000125310 Spata20-003 94484608-94486179 processed_transcript
  ENSMUST00000134332 Spata20-002 94478904-94485101 processed_transcript
  ENSMUST00000136362 Spata20-005 94483353-94485099 processed_transcript
  ENSMUST00000151707 Spata20-004 94483086-94484412 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000041705ENSMUST00000125310ENSMUST00000134332ENSMUST00000136362ENSMUST00000151707
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000041705 N/A 0.020±0.00 0.098±0.00 0.046±0.03 0.029±0.01 0.359±0.05 0.307±0.09 N/A 0.059±0.01 0.025±0.01 0.419±0.47 450.117±184.95
ENSMUST00000125310 0.128±0.00 N/A 0.127±0.00 N/A N/A N/A 0.307±0.00 N/A 0.398±0.00 0.470±0.24 N/A N/A
ENSMUST00000134332 0.032±0.02 0.009±0.00 0.017±0.00 0.040±0.03 0.050±0.01 0.139±0.00 0.083±0.00 0.003±0.00 0.109±0.01 0.048±0.04 N/A N/A
ENSMUST00000136362 0.043±0.00 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A 0.133±0.05 N/A N/A
ENSMUST00000151707 N/A N/A N/A 0.253±0.00 0.057±0.00 N/A N/A 0.014±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013880 spata20 spermatogenesis associated 20 protein_coding Danio_rerio
ENSG00000006282 SPATA20 spermatogenesis associated 20 protein_coding Homo_sapiens

Loading