C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134332 Spata20-002 ENSMUSG00000020867 10090 - 11:94478904-94485101 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000134332
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000134332 0.032±0.02 0.009±0.00 0.017±0.00 0.040±0.03 0.050±0.01 0.139±0.00 0.083±0.00 0.003±0.00 0.109±0.01 0.048±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000006658 SPATA20-001 protein_coding Homo_sapiens 0 1474
ENST00000356488 SPATA20-004 protein_coding Homo_sapiens 0 1474
ENST00000393244 SPATA20-201 protein_coding Homo_sapiens 0 1474
ENST00000502911 SPATA20-010 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000503063 SPATA20-008 retained_intron Homo_sapiens 0 889
ENST00000503127 SPATA20-003 nonsense_mediated_decay Homo_sapiens 0 1474
ENST00000504265 SPATA20-022 retained_intron Homo_sapiens 0 568
ENST00000504271 SPATA20-012 retained_intron Homo_sapiens 0 449
ENST00000504334 SPATA20-002 nonsense_mediated_decay Homo_sapiens 0 2313
ENST00000505085 SPATA20-009 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000505336 SPATA20-018 retained_intron Homo_sapiens 0 207
ENST00000505456 SPATA20-014 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000505559 SPATA20-005 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000505656 SPATA20-021 retained_intron Homo_sapiens 0 863
ENST00000508598 SPATA20-015 retained_intron Homo_sapiens 2e-37 159
ENST00000511347 SPATA20-020 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000511845 SPATA20-017 retained_intron Homo_sapiens 0 207
ENST00000511937 SPATA20-006 processed_transcript Homo_sapiens 0 913
ENST00000512181 SPATA20-007 retained_intron Homo_sapiens 0 765
ENST00000512416 SPATA20-019 retained_intron Homo_sapiens 0 521
ENST00000515526 SPATA20-016 retained_intron Homo_sapiens 1e-19 100
ENST00000515619 SPATA20-023 retained_intron Homo_sapiens 0 307
ENST00000619622 SPATA20-202 protein_coding Homo_sapiens 0 1474

Loading