C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: xylosyltransferase II
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020868 Xylt2 10090 - 11:94663851-94677515 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000116349 Xylt2-001 94663851-94677515 protein_coding
  ENSMUST00000146693 Xylt2-004 94668527-94677407 nonsense_mediated_decay
  ENSMUST00000150377 Xylt2-005 94666227-94668192 protein_coding
  ENSMUST00000153485 Xylt2-002 94664587-94677515 nonsense_mediated_decay
  ENSMUST00000154830 Xylt2-003 94666871-94667802 retained_intron
  ENSMUST00000174178 Xylt2-006 94675963-94677413 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116349ENSMUST00000153485ENSMUST00000154830
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116349 12.095±2.19 11.024±2.36 4.425±0.03 6.555±0.74 9.130±3.83 8.500±1.41 2.846±0.27 5.362±1.40 3.724±2.23 9.970±1.58 0.891±0.43 13.761±5.02 4.221±1.72 0.914±0.27
ENSMUST00000153485 N/A N/A N/A N/A N/A N/A 0.758±0.00 N/A N/A N/A 0.483±0.03 N/A 1.502±0.00 N/A
ENSMUST00000154830 N/A 10.717±1.06 N/A N/A 15.470±1.92 N/A N/A N/A N/A N/A N/A 14.765±2.10 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006024 IMP glycosaminoglycan biosynthetic process
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030158 IEA protein xylosyltransferase activity
GO:0030166 IMP proteoglycan biosynthetic process
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0030210 IMP heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059557 xylosyltransferase II protein_coding Danio_rerio
ENSDARG00000086781 XYLT2 xylosyltransferase II protein_coding Danio_rerio
ENSG00000015532 XYLT2 xylosyltransferase II protein_coding Homo_sapiens

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