C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, delta 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103077 Plcd3-001 ENSMUSG00000020937 10090 - 11:103070304-103101658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103077
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103077 7.867±3.44 9.034±1.31 16.548±1.68 1.529±1.04 6.942±3.31 5.134±1.82 3.375±1.40 3.145±0.22 0.366±0.30 4.515±0.99 1.601±0.73 5.732±2.60 4.464±2.23 1.495±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D8 CIL_0004D8_0003 CGP 11:103028190-103101658
CIL_00039B CIL_00039B_0002 CGP 11:103070304-103112200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IGI angiogenesis
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005829 IEA cytosol
GO:0016020 IEA membrane
GO:0016042 IEA lipid catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0042127 IGI regulation of cell proliferation
GO:0060716 IGI labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000538093 PLCD3-003 protein_coding Homo_sapiens 0 544
ENST00000543623 PLCD3-010 processed_transcript Homo_sapiens 0 625
ENST00000544446 PLCD3-012 processed_transcript Homo_sapiens 0 204
ENST00000546350 PLCD3-005 retained_intron Homo_sapiens 0 617
ENST00000590644 PLCD3-013 protein_coding Homo_sapiens 0 658
ENST00000611986 PLCD3-007 processed_transcript Homo_sapiens 0 355
ENST00000615898 PLCD3-008 processed_transcript Homo_sapiens 3.99931e-42 174
ENST00000618022 PLCD3-009 retained_intron Homo_sapiens 0 331
ENST00000619929 PLCD3-001 protein_coding Homo_sapiens 0 2501

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