C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003CU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002197-ENSDARG00000039123 CGP 7955 13:37248655-37312984
GeneTranscriptPositionBiotype
ENSDARG00000039123 (trim9)
tripartite motif-containing 9
ENSDART00000048739 (trim9-001) 37270231-37312984 protein_coding
CIL_0003CU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021069-ENSMUSG00000021071 CGP 10090 12:70190811-70347614
GeneTranscriptPositionBiotype
ENSMUSG00000021069 (Pygl)
liver glycogen phosphorylase
ENSMUST00000071250 (Pygl-001) 70190811-70227683 protein_coding
ENSMUST00000161083 (Pygl-002) 70190819-70231488 protein_coding
ENSMUST00000161840 (Pygl-003) 70210791-70227612 retained_intron
ENSMUST00000162613 (Pygl-004) 70197399-70197841 processed_transcript
ENSMUST00000166609 (Pygl-005) 70214348-70227345 processed_transcript
ENSMUSG00000021071 (Trim9)
tripartite motif-containing 9
ENSMUST00000110520 (Trim9-201) 70244539-70347614 protein_coding
ENSMUST00000110522 (Trim9-202) 70244539-70347614 protein_coding
ENSMUST00000167755 (Trim9-203) 70263732-70347614 protein_coding
ENSMUSG00000085298 (F730035M05Rik)
RIKEN cDNA F730035M05 gene
ENSMUST00000145871 (F730035M05Rik-001) 70227841-70234165 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CU_0001ENSDARG00000039123ENSDART00000048739CIL_0003CU_0002ENSMUSG00000021069ENSMUST00000071250ENSMUST00000161083ENSMUST00000161840ENSMUST00000162613ENSMUST00000166609ENSMUSG00000021071ENSMUST00000110520ENSMUST00000110522ENSMUST00000167755ENSMUSG00000085298ENSMUST00000145871
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CU_0001ENSDARG00000039123ENSDART00000048739CIL_0003CU_0002ENSMUSG00000021069ENSMUST00000071250ENSMUST00000161083ENSMUST00000161840ENSMUST00000166609ENSMUSG00000021071ENSMUST00000110520ENSMUST00000110522ENSMUST00000167755ENSMUSG00000085298ENSMUST00000145871
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039123 ENSDART00000048739 N/A N/A N/A 24.188±17.82 N/A N/A 0.796±0.40 1.168±0.67 0.090±0.00 N/A 1.906±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021069 ENSMUST00000071250 76.608±24.03 40.701±11.60 12.264±0.29 2.241±0.21 57.262±11.75 4.031±0.77 4.353±1.42 15.793±1.07 95.535±48.88 16.033±1.57 0.499±0.26 12.235±4.93 28.646±10.39 1.247±0.33
ENSMUST00000161083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSMUST00000161840 48.184±7.38 65.003±10.13 N/A N/A 85.412±33.52 2.548±0.48 3.795±1.51 15.347±1.78 143.418±16.27 17.603±4.01 N/A 8.252±1.83 N/A N/A
ENSMUST00000162613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.157±0.00 13.308±0.00 N/A
ENSMUSG00000021071 ENSMUST00000110520 0.030±0.02 0.177±0.12 0.015±0.01 10.019±2.67 0.297±0.10 0.190±0.08 0.016±0.00 0.043±0.01 0.014±0.01 0.037±0.02 0.012±0.00 0.604±0.33 0.020±0.01 N/A
ENSMUST00000110522 0.006±0.00 0.134±0.06 N/A 4.707±2.25 0.097±0.00 0.252±0.06 N/A N/A N/A N/A N/A N/A N/A 0.228±0.00
ENSMUST00000167755 N/A N/A N/A N/A N/A N/A N/A 0.016±0.01 N/A 0.008±0.00 0.009±0.00 0.157±0.01 0.006±0.00 0.090±0.00
ENSMUSG00000085298 ENSMUST00000145871 0.082±0.05 0.074±0.00 0.066±0.03 0.070±0.06 0.136±0.09 N/A 0.026±0.00 0.048±0.02 0.060±0.03 0.069±0.03 0.043±0.00 0.136±0.11 0.090±0.06 0.075±0.03

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