C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: liver glycogen phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071250 Pygl-001 ENSMUSG00000021069 10090 - 12:70190811-70227683 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071250
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071250 76.608±24.03 40.701±11.60 12.264±0.29 2.241±0.21 57.262±11.75 4.031±0.77 4.353±1.42 15.793±1.07 95.535±48.88 16.033±1.57 0.499±0.26 12.235±4.93 28.646±10.39 1.247±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CU CIL_0003CU_0002 CGP 12:70190811-70347614

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002060 IEA purine nucleobase binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005977 IDA glycogen metabolic process
GO:0005980 IEA glycogen catabolic process
GO:0006015 IEA 5-phosphoribose 1-diphosphate biosynthetic process
GO:0008144 IEA drug binding
GO:0008184 IDA glycogen phosphorylase activity
GO:0016208 IEA AMP binding
GO:0019842 IEA vitamin binding
GO:0030170 IEA pyridoxal phosphate binding
GO:0030246 IEA carbohydrate binding
GO:0032052 IEA bile acid binding
GO:0042593 IEA glucose homeostasis
GO:0042803 IEA protein homodimerization activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070266 IGI necroptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000127467 pygmb-202 protein_coding Danio_rerio 0 1031
ENSDART00000148576 pygmb-001 protein_coding Danio_rerio 0 1031
ENSDART00000077871 pygma-001 protein_coding Danio_rerio 0 1029
ENST00000216392 PYGL-001 protein_coding Homo_sapiens 0 3151
ENST00000530336 PYGL-004 retained_intron Homo_sapiens 0 907
ENST00000532107 PYGL-006 retained_intron Homo_sapiens 0 760
ENST00000532462 PYGL-003 protein_coding Homo_sapiens 0 2979
ENST00000544180 PYGL-002 protein_coding Homo_sapiens 0 2645
ENST00000553872 PYGL-010 retained_intron Homo_sapiens 0 327

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