C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tryptophanyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160477 Wars-002 ENSMUSG00000021266 10090 - 12:108860030-108894137 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverOvaryENSMUST00000160477
Transcript ID Adrenal Breast Liver Ovary
ENSMUST00000160477 23.634±5.61 23.753±0.00 1.840±0.00 20.583±5.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AG CIL_0004AG_0002 CGP 12:108851129-108894174
CIL_0004AF CIL_0004AF_0002 CGP 12:108860030-109028452

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0006418 IEA tRNA aminoacylation for protein translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344102 WARS-006 protein_coding Homo_sapiens 0 1519
ENST00000355338 WARS-005 protein_coding Homo_sapiens 0 1520
ENST00000358655 WARS-004 protein_coding Homo_sapiens 0 1519
ENST00000392882 WARS-001 protein_coding Homo_sapiens 0 1520
ENST00000553395 WARS-025 protein_coding Homo_sapiens 0 752
ENST00000554601 WARS-043 protein_coding Homo_sapiens 0 497
ENST00000554950 WARS-041 retained_intron Homo_sapiens 0 987
ENST00000556645 WARS-003 protein_coding Homo_sapiens 0 1519
ENST00000557135 WARS-007 protein_coding Homo_sapiens 0 1520
ENST00000557614 WARS-044 retained_intron Homo_sapiens 0 361

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