C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tryptophanyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161410 Wars-003 ENSMUSG00000021266 10090 - 12:108860030-108893198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000161410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000161410 13.817±1.19 5.745±1.40 6.692±0.00 5.590±0.00 11.316±5.80 17.459±2.49 6.282±1.99 3.948±0.86 17.252±7.03 1.762±0.22 9.750±1.52 10.321±5.40 4.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AG CIL_0004AG_0002 CGP 12:108851129-108894174
CIL_0004AF CIL_0004AF_0002 CGP 12:108860030-109028452

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0004830 IEA tryptophan-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006436 IEA tryptophanyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344102 WARS-006 protein_coding Homo_sapiens 0 1517
ENST00000355338 WARS-005 protein_coding Homo_sapiens 0 1613
ENST00000358655 WARS-004 protein_coding Homo_sapiens 0 1517
ENST00000392882 WARS-001 protein_coding Homo_sapiens 0 1613
ENST00000553395 WARS-025 protein_coding Homo_sapiens 0 747
ENST00000554601 WARS-043 protein_coding Homo_sapiens 0 497
ENST00000554950 WARS-041 retained_intron Homo_sapiens 0 987
ENST00000556645 WARS-003 protein_coding Homo_sapiens 0 1517
ENST00000557135 WARS-007 protein_coding Homo_sapiens 0 1613
ENST00000557614 WARS-044 retained_intron Homo_sapiens 0 361

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