C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021360 Gcnt2 10090 + 13:40859768-40960891 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067778 Gcnt2-201 40917634-40960891 protein_coding
  ENSMUST00000069958 Gcnt2-202 40886758-40960891 protein_coding
  ENSMUST00000110191 Gcnt2-203 40859768-40960891 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000067778ENSMUST00000069958ENSMUST00000110191
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000067778 3.587±0.42 4.338±0.00 2.146±0.00 2.237±0.37 N/A 1.093±0.00 N/A N/A 3.867±0.66 N/A 4.065±0.28 7.252±1.69
ENSMUST00000069958 3.470±0.81 N/A N/A N/A N/A N/A 1.798±0.00 N/A 3.453±0.31 1.650±0.06 3.456±0.09 N/A
ENSMUST00000110191 N/A 4.680±0.42 N/A 1.439±0.00 3.393±0.00 0.984±0.00 4.449±0.74 2.366±0.43 4.762±0.31 N/A N/A 4.456±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097A CIL_00097A_0002 VISTA 13:40412299-41013499
CIL_00086X CIL_00086X_0002 VISTA 13:40425554-41028254
CIL_000382 CIL_000382_0002 CGP 13:40715675-40960891

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0007179 IMP transforming growth factor beta receptor signaling pathway
GO:0008109 IEA N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity
GO:0008152 IEA metabolic process
GO:0008284 IMP positive regulation of cell proliferation
GO:0008375 IDA acetylglucosaminyltransferase activity
GO:0010608 IMP posttranscriptional regulation of gene expression
GO:0010718 IMP positive regulation of epithelial to mesenchymal transition
GO:0010812 IEA negative regulation of cell-substrate adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030335 IEA positive regulation of cell migration
GO:0034116 IEA positive regulation of heterotypic cell-cell adhesion
GO:0036438 IEA maintenance of lens transparency
GO:0051897 IMP positive regulation of protein kinase B signaling
GO:0070374 IMP positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111846 GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) protein_coding Homo_sapiens

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