C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000382_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137203-ENSG00000111846 CGP 9606 6:10393186-10629368
GeneTranscriptPositionBiotype
ENSG00000111846 (GCNT2)
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 		ENST00000265012 (GCNT2-004) 10585746-10629368 protein_coding
ENST00000316170 (GCNT2-001) 10556007-10629368 protein_coding
ENST00000379597 (GCNT2-003) 10528356-10629367 protein_coding
ENST00000397423 (GCNT2-002) 10521332-10629367 processed_transcript
ENST00000410107 (GCNT2-010) 10492223-10627222 protein_coding
ENST00000459872 (GCNT2-016) 10556801-10619441 processed_transcript
ENST00000461400 (GCNT2-005) 10529812-10621645 retained_intron
ENST00000474518 (GCNT2-014) 10521485-10621422 processed_transcript
ENST00000474983 (GCNT2-007) 10521309-10530267 retained_intron
ENST00000475577 (GCNT2-012) 10521351-10626616 processed_transcript
ENST00000483204 (GCNT2-008) 10527366-10529950 retained_intron
ENST00000485764 (GCNT2-017) 10529797-10626464 processed_transcript
ENST00000488742 (GCNT2-015) 10492226-10528707 processed_transcript
ENST00000489225 (GCNT2-009) 10492224-10626972 processed_transcript
ENST00000489819 (GCNT2-013) 10521420-10626557 processed_transcript
ENST00000495262 (GCNT2-006) 10521351-10627077 protein_coding
ENST00000498320 (GCNT2-011) 10521283-10529109 processed_transcript
ENSG00000137203 (TFAP2A)
transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 		ENST00000319516 (TFAP2A-003) 10397872-10419638 protein_coding
ENST00000379604 (TFAP2A-201) 10396683-10415237 protein_coding
ENST00000379608 (TFAP2A-005) 10397915-10412374 protein_coding
ENST00000379613 (TFAP2A-001) 10396677-10415248 protein_coding
ENST00000461628 (TFAP2A-017) 10393186-10404594 protein_coding
ENST00000462727 (TFAP2A-014) 10406794-10410942 processed_transcript
ENST00000464323 (TFAP2A-006) 10409086-10419554 retained_intron
ENST00000465858 (TFAP2A-016) 10409997-10412879 protein_coding
ENST00000466073 (TFAP2A-010) 10398602-10414985 protein_coding
ENST00000473652 (TFAP2A-013) 10404668-10419659 processed_transcript
ENST00000474952 (TFAP2A-012) 10406136-10412046 retained_intron
ENST00000475264 (TFAP2A-018) 10400714-10410094 protein_coding
ENST00000478375 (TFAP2A-002) 10402026-10414985 retained_intron
ENST00000482890 (TFAP2A-007) 10398013-10416190 protein_coding
ENST00000486038 (TFAP2A-019) 10418189-10419623 processed_transcript
ENST00000488193 (TFAP2A-008) 10397915-10415206 nonsense_mediated_decay
ENST00000489805 (TFAP2A-011) 10397410-10412175 nonsense_mediated_decay
ENST00000490875 (TFAP2A-004) 10404621-10417207 processed_transcript
ENST00000497266 (TFAP2A-015) 10398688-10411018 processed_transcript
ENST00000498450 (TFAP2A-009) 10402538-10415000 protein_coding
ENSG00000183674 (LINC00518)
long intergenic non-protein coding RNA 518 		ENST00000472178 (LINC00518-005) 10429709-10434495 lincRNA
ENST00000479822 (LINC00518-003) 10429718-10434835 lincRNA
ENST00000487130 (LINC00518-002) 10429548-10434874 lincRNA
ENST00000491317 (LINC00518-004) 10429796-10434817 lincRNA
ENST00000496285 (LINC00518-001) 10429255-10434822 lincRNA
ENSG00000216359 (RP11-360O19.1)
 ENST00000401900 (RP11-360O19.1-001) 10514282-10514973 processed_pseudogene
ENSG00000217181 (RP11-360O19.5)
 ENST00000407436 (RP11-360O19.5-001) 10574749-10575227 processed_pseudogene
ENSG00000228478 (RP1-290I10.3)
 ENST00000420389 (RP1-290I10.3-001) 10423140-10426176 lincRNA
ENSG00000229401 (RP1-290I10.7)
 ENST00000366312 (RP1-290I10.7-002) 10434329-10456781 lincRNA
ENST00000449333 (RP1-290I10.7-001) 10434316-10452247 lincRNA
ENSG00000229950 (TFAP2A-AS1)
TFAP2A antisense RNA 1 		ENST00000420777 (TFAP2A-AS1-002) 10409340-10416446 antisense
ENST00000443546 (TFAP2A-AS1-001) 10414578-10415722 antisense
ENSG00000231056 (RP1-290I10.5)
 ENST00000431401 (RP1-290I10.5-001) 10474500-10478502 lincRNA
ENSG00000237685 (RP11-360O19.4)
 ENST00000413129 (RP11-360O19.4-001) 10511036-10514546 antisense
ENSG00000238076 (MRPL48P1)
mitochondrial ribosomal protein L48 pseudogene 1 		ENST00000445390 (MRPL48P1-001) 10459906-10460541 processed_pseudogene
CIL_000382_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021359-ENSMUSG00000021360 CGP 10090 13:40715675-40960891
GeneTranscriptPositionBiotype
ENSMUSG00000021359 (Tfap2a)
transcription factor AP-2, alpha 		ENSMUST00000021787 (Tfap2a-201) 40715675-40730418 protein_coding
ENSMUST00000110193 (Tfap2a-202) 40715675-40733823 protein_coding
ENSMUSG00000021360 (Gcnt2)
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme 		ENSMUST00000067778 (Gcnt2-201) 40917634-40960891 protein_coding
ENSMUST00000069958 (Gcnt2-202) 40886758-40960891 protein_coding
ENSMUST00000110191 (Gcnt2-203) 40859768-40960891 protein_coding
ENSMUSG00000086693 (A730081D07Rik)
RIKEN cDNA A730081D07 gene 		ENSMUST00000153685 (A730081D07Rik-001) 40956414-41001151 processed_transcript
ENSMUSG00000090475 (Gm6245)
predicted gene 6245 		ENSMUST00000164699 (Gm6245-201) 40778040-40778807 processed_pseudogene
ENSMUSG00000097752 (Gm26688)
predicted gene, 26688 		ENSMUST00000181176 (Gm26688-001) 40727808-40735162 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111846 ENST00000265012 N/A 0.171±0.00 N/A 0.131±0.07 N/A 1.633±0.00 1.761±0.80 N/A N/A 0.813±0.00 0.128±0.00 0.289±0.00 N/A N/A
ENST00000316170 N/A N/A N/A 0.068±0.00 0.676±0.00 0.971±0.00 0.795±0.00 N/A 0.733±0.00 N/A 0.146±0.00 0.080±0.00 0.145±0.00 N/A
ENST00000379597 0.172±0.00 N/A 0.701±0.00 0.058±0.00 0.352±0.19 1.420±1.11 0.761±0.00 1.893±1.06 1.482±0.00 N/A N/A 0.465±0.28 0.504±0.11 N/A
ENST00000397423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.201±0.00 N/A
ENST00000410107 N/A N/A N/A N/A 1.072±0.00 N/A 3.398±0.00 1.921±0.00 N/A 4.754±0.00 N/A N/A N/A N/A
ENST00000459872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.670±0.00 N/A 1.647±0.00
ENST00000474983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483204 N/A N/A N/A N/A N/A N/A N/A N/A 0.597±0.00 N/A 0.136±0.00 N/A N/A N/A
ENST00000485764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.502±0.00
ENST00000489225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495262 N/A N/A N/A N/A N/A N/A 1.652±0.00 0.815±0.00 N/A N/A N/A N/A 1.058±0.00 N/A
ENST00000498320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.357±0.00 N/A
ENSG00000137203 ENST00000319516 0.053±0.00 N/A 0.798±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379604 0.031±0.00 N/A N/A 0.076±0.00 0.319±0.26 N/A N/A 2.454±0.00 0.003±0.00 N/A N/A 0.347±0.00 13.644±7.07 N/A
ENST00000379608 0.058±0.00 N/A 0.406±0.00 N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A 0.404±0.00 9.734±3.08 0.631±0.00
ENST00000379613 N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A
ENST00000461628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464323 N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466073 0.318±0.00 N/A N/A N/A N/A 0.509±0.00 N/A N/A N/A N/A N/A 9.731±0.00 23.330±0.00 N/A
ENST00000473652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474952 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A 3.565±0.00 N/A 0.646±0.00
ENST00000475264 N/A N/A N/A N/A 1.049±0.00 0.178±0.00 N/A N/A N/A N/A N/A N/A 23.617±0.00 2.638±0.00
ENST00000478375 N/A 0.061±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482890 N/A N/A N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488193 N/A N/A 0.522±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489805 N/A 0.043±0.00 N/A N/A N/A 0.299±0.00 0.013±0.00 0.549±0.53 N/A N/A N/A 2.442±0.00 10.300±0.00 1.183±0.00
ENST00000490875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497266 N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A
ENST00000498450 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A 5.099±0.00
ENSG00000183674 ENST00000472178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.087±0.00
ENST00000479822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487130 N/A N/A N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00
ENST00000491317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.01 0.121±0.00
ENSG00000216359 ENST00000401900 N/A N/A N/A N/A N/A N/A 0.079±0.00 0.241±0.00 N/A N/A N/A N/A 0.072±0.01 0.100±0.02
ENSG00000217181 ENST00000407436 N/A 0.089±0.00 0.255±0.00 0.120±0.00 0.146±0.00 0.140±0.05 N/A 0.176±0.00 N/A N/A N/A 0.050±0.00 0.044±0.00 0.053±0.00
ENSG00000228478 ENST00000420389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00
ENSG00000229401 ENST00000366312 0.267±0.00 0.227±0.00 N/A 0.158±0.00 0.089±0.00 N/A 0.026±0.00 N/A N/A 0.055±0.00 N/A 0.063±0.00 N/A N/A
ENST00000449333 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229950 ENST00000420777 N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231056 ENST00000431401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 0.397±0.24
ENSG00000237685 ENST00000413129 0.017±0.00 N/A N/A N/A 0.112±0.00 N/A 0.016±0.00 0.051±0.00 N/A N/A N/A 0.024±0.00 N/A 0.056±0.00
ENSG00000238076 ENST00000445390 N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A 0.141±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021359 ENSMUST00000021787 N/A N/A 0.068±0.00 2.451±1.65 1.198±0.73 0.022±0.01 N/A 0.619±0.25 N/A 0.391±0.27 N/A N/A 0.487±0.34 0.128±0.03
ENSMUST00000110193 0.050±0.02 0.050±0.04 0.108±0.00 1.498±1.71 0.704±0.30 0.041±0.01 0.034±0.02 0.700±0.32 0.027±0.02 0.154±0.00 0.044±0.01 0.091±0.05 1.946±1.77 0.237±0.00
ENSMUSG00000021360 ENSMUST00000067778 3.587±0.42 N/A 4.338±0.00 2.146±0.00 2.237±0.37 N/A 1.093±0.00 N/A N/A 3.867±0.66 N/A 4.065±0.28 7.252±1.69 N/A
ENSMUST00000069958 3.470±0.81 N/A N/A N/A N/A N/A N/A 1.798±0.00 N/A 3.453±0.31 1.650±0.06 3.456±0.09 N/A N/A
ENSMUST00000110191 N/A N/A 4.680±0.42 N/A 1.439±0.00 3.393±0.00 0.984±0.00 4.449±0.74 2.366±0.43 4.762±0.31 N/A N/A 4.456±0.00 N/A
ENSMUSG00000086693 ENSMUST00000153685 N/A N/A N/A 3.964±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090475 ENSMUST00000164699 N/A N/A 0.044±0.00 0.011±0.00 0.119±0.03 N/A 0.066±0.00 N/A 0.010±0.00 N/A 0.115±0.07 0.038±0.01 0.056±0.00 0.061±0.00
ENSMUSG00000097752 ENSMUST00000181176 0.050±0.00 N/A 0.146±0.00 N/A N/A N/A 0.021±0.00 N/A 0.008±0.00 0.073±0.00 0.034±0.00 0.034±0.00 N/A N/A

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