C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AU RNA binding protein/enoyl-coenzyme A hydratase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021460 Auh 10090 - 13:52835119-52929681 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021913 Auh-001 52835119-52929661 protein_coding
  ENSMUST00000110031 Auh-002 52910210-52929681 protein_coding
  ENSMUST00000119311 Auh-003 52907045-52929654 protein_coding
  ENSMUST00000120535 Auh-004 52895927-52929652 protein_coding
  ENSMUST00000123599 Auh-008 52840869-52929458 protein_coding
  ENSMUST00000128380 Auh-005 52886428-52929648 retained_intron
  ENSMUST00000128544 Auh-013 52908906-52919268 processed_transcript
  ENSMUST00000132598 Auh-010 52896703-52923865 processed_transcript
  ENSMUST00000133906 Auh-009 52912849-52923868 processed_transcript
  ENSMUST00000137064 Auh-006 52835119-52919232 nonsense_mediated_decay
  ENSMUST00000142515 Auh-011 52908895-52923844 processed_transcript
  ENSMUST00000151469 Auh-007 52928489-52929652 processed_transcript
  ENSMUST00000153329 Auh-012 52918774-52923860 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021913ENSMUST00000110031ENSMUST00000119311ENSMUST00000123599ENSMUST00000128380ENSMUST00000151469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021913 17.732±3.82 22.979±3.06 18.667±3.21 11.506±2.36 12.881±2.33 5.496±1.68 38.641±5.08 43.732±5.15 13.854±2.54 8.371±0.70 25.125±1.60 10.159±3.97 7.382±4.33 2.014±0.23
ENSMUST00000110031 2.988±0.27 3.278±0.38 2.081±0.00 1.340±0.06 2.654±0.33 1.134±0.23 N/A 2.635±0.29 1.651±0.33 2.293±0.10 N/A 2.303±0.74 0.955±0.61 0.394±0.21
ENSMUST00000119311 4.102±1.46 5.127±0.70 2.891±0.21 2.280±0.07 3.968±0.06 1.429±0.23 N/A 3.882±0.52 2.202±0.70 3.438±0.34 N/A 3.578±1.21 1.122±0.75 0.430±0.09
ENSMUST00000123599 N/A N/A N/A 33.501±0.00 12.484±0.00 N/A 16.131±0.00 N/A N/A N/A N/A 13.560±0.00 3.568±0.68 1.730±0.43
ENSMUST00000128380 N/A N/A N/A N/A N/A 1.261±0.00 N/A N/A 2.017±0.00 N/A N/A N/A N/A 0.733±0.03
ENSMUST00000151469 N/A 82.418±35.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JN CIL_0002JN_0002 CGP 13:52583173-52929681
CIL_00068X CIL_00068X_0002 CGP 13:52835119-52981073

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000288 TAS nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0003723 IDA RNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0004300 ISS enoyl-CoA hydratase activity
GO:0004490 IEA methylglutaconyl-CoA hydratase activity
GO:0005739 ISS mitochondrion
GO:0006552 IEA leucine catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042975 auh AU RNA binding protein/enoyl-Coenzyme A hydratase protein_coding Danio_rerio
ENSG00000148090 AUH AU RNA binding protein/enoyl-CoA hydratase protein_coding Homo_sapiens

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