C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AU RNA binding protein/enoyl-coenzyme A hydratase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021913 Auh-001 ENSMUSG00000021460 10090 - 13:52835119-52929661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021913 17.732±3.82 22.979±3.06 18.667±3.21 11.506±2.36 12.881±2.33 5.496±1.68 38.641±5.08 43.732±5.15 13.854±2.54 8.371±0.70 25.125±1.60 10.159±3.97 7.382±4.33 2.014±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JN CIL_0002JN_0002 CGP 13:52583173-52929681
CIL_00068X CIL_00068X_0002 CGP 13:52835119-52981073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000288 TAS nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0003723 IDA RNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0004300 ISS enoyl-CoA hydratase activity
GO:0004490 IEA methylglutaconyl-CoA hydratase activity
GO:0005739 ISS mitochondrion
GO:0006552 IEA leucine catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303617 AUH-002 protein_coding Homo_sapiens 0 566
ENST00000375731 AUH-001 protein_coding Homo_sapiens 0 939
ENST00000473695 AUH-005 processed_transcript Homo_sapiens 0 193
ENST00000478465 AUH-003 processed_transcript Homo_sapiens 0 294

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