C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AU RNA binding protein/enoyl-coenzyme A hydratase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110031 Auh-002 ENSMUSG00000021460 10090 - 13:52910210-52929681 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000110031
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000110031 2.988±0.27 3.278±0.38 2.081±0.00 1.340±0.06 2.654±0.33 1.134±0.23 2.635±0.29 1.651±0.33 2.293±0.10 2.303±0.74 0.955±0.61 0.394±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JN CIL_0002JN_0002 CGP 13:52583173-52929681
CIL_00068X CIL_00068X_0002 CGP 13:52835119-52981073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000288 TAS nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0003723 IDA RNA binding
GO:0004300 IDA enoyl-CoA hydratase activity
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303617 AUH-002 protein_coding Homo_sapiens 0 289
ENST00000375731 AUH-001 protein_coding Homo_sapiens 0 289
ENST00000478465 AUH-003 processed_transcript Homo_sapiens 2e-24 117

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