C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165025-ENSG00000148090 CGP 9606 9:90801787-91361913
GeneTranscriptPositionBiotype
ENSG00000148090 (AUH)
AU RNA binding protein/enoyl-CoA hydratase 		ENST00000303617 (AUH-002) 91213815-91361913 protein_coding
ENST00000375731 (AUH-001) 91213815-91361913 protein_coding
ENST00000473695 (AUH-005) 91213960-91220919 processed_transcript
ENST00000475023 (AUH-004) 91342715-91356121 processed_transcript
ENST00000478465 (AUH-003) 91297991-91361887 processed_transcript
ENSG00000228216 (RP11-367F23.1)
 ENST00000427745 (RP11-367F23.1-001) 90957260-90965393 lincRNA
ENSG00000229694 (RP11-305L7.6)
 ENST00000414768 (RP11-305L7.6-002) 91170673-91182717 lincRNA
ENST00000421595 (RP11-305L7.6-004) 91182057-91182717 lincRNA
ENST00000437389 (RP11-305L7.6-003) 91170669-91182717 lincRNA
ENST00000439438 (RP11-305L7.6-001) 91119062-91182762 lincRNA
ENSG00000230147 (RP11-305L7.5)
 ENST00000430315 (RP11-305L7.5-001) 91169585-91170045 processed_pseudogene
ENSG00000230537 (RP11-305L7.1)
 ENST00000423380 (RP11-305L7.1-001) 91104957-91107304 lincRNA
ENSG00000235641 (LINC00484)
long intergenic non-protein coding RNA 484 		ENST00000423719 (LINC00484-001) 91159573-91165576 lincRNA
ENST00000588550 (LINC00484-002) 91162498-91163331 lincRNA
ENST00000608240 (LINC00484-004) 91160356-91162632 lincRNA
ENST00000609752 (LINC00484-003) 91159601-91162705 lincRNA
ENSG00000237422 (RP11-305L7.3)
 ENST00000457976 (RP11-305L7.3-001) 91119138-91163087 lincRNA
ENSG00000260454 (RP11-367F23.2)
 ENST00000563268 (RP11-367F23.2-001) 90997054-91001871 lincRNA
ENSG00000273381 (RP11-305L7.7)
 ENST00000608358 (RP11-305L7.7-001) 91206175-91210299 lincRNA
CIL_0002JN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021457-ENSMUSG00000021460 CGP 10090 13:52583173-52929681
GeneTranscriptPositionBiotype
ENSMUSG00000021457 (Syk)
spleen tyrosine kinase 		ENSMUST00000055087 (Syk-002) 52596853-52648782 protein_coding
ENSMUST00000118756 (Syk-003) 52583437-52643614 protein_coding
ENSMUST00000120135 (Syk-001) 52583173-52648792 protein_coding
ENSMUST00000140339 (Syk-005) 52596959-52624339 retained_intron
ENSMUST00000150672 (Syk-004) 52583503-52613685 retained_intron
ENSMUSG00000021460 (Auh)
AU RNA binding protein/enoyl-coenzyme A hydratase 		ENSMUST00000021913 (Auh-001) 52835119-52929661 protein_coding
ENSMUST00000110031 (Auh-002) 52910210-52929681 protein_coding
ENSMUST00000119311 (Auh-003) 52907045-52929654 protein_coding
ENSMUST00000120535 (Auh-004) 52895927-52929652 protein_coding
ENSMUST00000123599 (Auh-008) 52840869-52929458 protein_coding
ENSMUST00000128380 (Auh-005) 52886428-52929648 retained_intron
ENSMUST00000128544 (Auh-013) 52908906-52919268 processed_transcript
ENSMUST00000132598 (Auh-010) 52896703-52923865 processed_transcript
ENSMUST00000133906 (Auh-009) 52912849-52923868 processed_transcript
ENSMUST00000137064 (Auh-006) 52835119-52919232 nonsense_mediated_decay
ENSMUST00000142515 (Auh-011) 52908895-52923844 processed_transcript
ENSMUST00000151469 (Auh-007) 52928489-52929652 processed_transcript
ENSMUST00000153329 (Auh-012) 52918774-52923860 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JN_0001ENSG00000148090ENST00000303617ENST00000375731ENST00000473695ENST00000475023ENST00000478465ENSG00000228216ENST00000427745ENSG00000229694ENST00000414768ENST00000421595ENST00000437389ENST00000439438ENSG00000230147ENST00000430315ENSG00000230537ENST00000423380ENSG00000235641ENST00000423719ENST00000588550ENST00000608240ENST00000609752ENSG00000237422ENST00000457976ENSG00000260454ENST00000563268ENSG00000273381ENST00000608358CIL_0002JN_0002ENSMUSG00000021457ENSMUST00000055087ENSMUST00000118756ENSMUST00000120135ENSMUST00000140339ENSMUST00000150672ENSMUSG00000021460ENSMUST00000021913ENSMUST00000110031ENSMUST00000119311ENSMUST00000120535ENSMUST00000123599ENSMUST00000128380ENSMUST00000128544ENSMUST00000132598ENSMUST00000133906ENSMUST00000137064ENSMUST00000142515ENSMUST00000151469ENSMUST00000153329
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JN_0001ENSG00000148090ENST00000303617ENST00000375731ENST00000473695ENST00000475023ENST00000478465ENSG00000228216ENST00000427745ENSG00000229694ENST00000414768ENST00000421595ENST00000437389ENST00000439438ENSG00000230147ENST00000430315ENSG00000230537ENST00000423380ENSG00000235641ENST00000423719ENST00000588550ENST00000608240ENST00000609752ENSG00000237422ENST00000457976ENSG00000260454ENST00000563268ENSG00000273381ENST00000608358CIL_0002JN_0002ENSMUSG00000021457ENSMUST00000055087ENSMUST00000120135ENSMUST00000140339ENSMUSG00000021460ENSMUST00000021913ENSMUST00000110031ENSMUST00000119311ENSMUST00000123599ENSMUST00000128380ENSMUST00000151469
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148090 ENST00000303617 N/A N/A N/A 3.727±0.00 N/A 1.908±0.00 2.855±0.00 3.243±0.00 1.573±0.00 N/A 2.182±0.00 1.257±0.00 2.029±0.79 0.461±0.00
ENST00000375731 3.788±0.00 3.525±0.00 6.943±0.00 6.897±3.59 3.549±1.77 6.367±0.00 11.566±0.00 14.946±0.00 6.156±0.00 3.952±1.41 N/A 5.200±1.17 4.339±1.59 4.012±0.00
ENST00000473695 N/A N/A N/A 3.113±0.00 1.420±0.00 1.938±0.00 N/A 11.090±0.00 3.449±0.00 N/A N/A N/A N/A N/A
ENST00000475023 N/A 1.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.093±0.00 N/A N/A
ENST00000478465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.989±0.00 3.617±0.00 1.796±0.00 1.704±0.00
ENSG00000228216 ENST00000427745 N/A N/A N/A 0.217±0.00 N/A 0.831±0.00 0.049±0.00 N/A N/A N/A 0.096±0.00 0.294±0.00 0.195±0.00 0.959±0.00
ENSG00000229694 ENST00000414768 N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00
ENST00000421595 N/A N/A N/A N/A N/A 0.514±0.00 0.762±0.00 0.135±0.00 N/A N/A N/A N/A N/A N/A
ENST00000437389 N/A N/A N/A 0.649±0.38 2.056±0.00 0.728±0.00 0.219±0.00 0.429±0.00 N/A 1.113±0.92 N/A 1.018±0.00 0.240±0.03 N/A
ENST00000439438 1.224±0.00 0.210±0.00 N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A 0.341±0.00 0.278±0.16 0.365±0.00
ENSG00000230147 ENST00000430315 N/A N/A 0.164±0.00 N/A 0.059±0.00 N/A 0.122±0.10 N/A N/A N/A N/A 0.128±0.04 N/A 0.134±0.00
ENSG00000230537 ENST00000423380 0.413±0.00 0.341±0.00 0.288±0.00 0.162±0.00 0.366±0.00 0.018±0.00 0.123±0.00 0.652±0.00 0.154±0.00 0.354±0.00 0.992±0.00 0.710±0.46 0.232±0.00 0.249±0.15
ENSG00000235641 ENST00000423719 N/A 0.025±0.00 N/A N/A 0.109±0.02 0.031±0.00 0.061±0.00 0.084±0.00 0.072±0.00 0.097±0.01 0.027±0.00 0.159±0.13 N/A 0.108±0.04
ENST00000588550 N/A N/A N/A N/A N/A 0.063±0.00 0.283±0.00 0.710±0.00 0.728±0.00 N/A N/A N/A N/A N/A
ENST00000608240 N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A 0.152±0.00 N/A
ENST00000609752 N/A 0.110±0.00 N/A N/A N/A 0.377±0.00 N/A 0.355±0.00 N/A N/A N/A 0.260±0.00 0.071±0.00 N/A
ENSG00000237422 ENST00000457976 0.523±0.00 0.060±0.00 N/A 0.184±0.00 0.894±0.00 N/A 1.019±0.00 0.270±0.00 0.051±0.00 0.216±0.00 N/A 0.272±0.13 0.335±0.11 0.219±0.00
ENSG00000260454 ENST00000563268 0.053±0.00 N/A N/A 0.009±0.00 N/A 0.033±0.00 N/A 0.044±0.00 0.015±0.00 N/A N/A 0.130±0.15 0.028±0.00 N/A
ENSG00000273381 ENST00000608358 0.042±0.00 0.085±0.00 0.665±0.00 0.117±0.00 0.098±0.02 0.130±0.03 0.140±0.06 0.119±0.00 0.102±0.05 0.106±0.01 0.010±0.00 0.228±0.09 0.038±0.01 0.068±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021457 ENSMUST00000055087 1.760±0.84 0.753±0.20 1.074±0.40 0.505±0.04 7.394±3.95 N/A 1.466±0.36 0.716±0.32 1.205±0.64 2.721±0.43 0.546±0.07 2.134±1.65 1.413±1.02 0.193±0.04
ENSMUST00000118756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120135 2.615±0.75 0.980±0.32 0.847±0.30 0.241±0.08 7.587±3.21 8.137±3.67 1.969±0.66 0.750±0.11 1.904±1.06 5.081±1.10 0.630±0.20 1.947±0.76 0.993±1.00 0.125±0.04
ENSMUST00000140339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.592±0.00 N/A N/A
ENSMUST00000150672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021460 ENSMUST00000021913 17.732±3.82 22.979±3.06 18.667±3.21 11.506±2.36 12.881±2.33 5.496±1.68 38.641±5.08 43.732±5.15 13.854±2.54 8.371±0.70 25.125±1.60 10.159±3.97 7.382±4.33 2.014±0.23
ENSMUST00000110031 2.988±0.27 3.278±0.38 2.081±0.00 1.340±0.06 2.654±0.33 1.134±0.23 N/A 2.635±0.29 1.651±0.33 2.293±0.10 N/A 2.303±0.74 0.955±0.61 0.394±0.21
ENSMUST00000119311 4.102±1.46 5.127±0.70 2.891±0.21 2.280±0.07 3.968±0.06 1.429±0.23 N/A 3.882±0.52 2.202±0.70 3.438±0.34 N/A 3.578±1.21 1.122±0.75 0.430±0.09
ENSMUST00000120535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123599 N/A N/A N/A 33.501±0.00 12.484±0.00 N/A 16.131±0.00 N/A N/A N/A N/A 13.560±0.00 3.568±0.68 1.730±0.43
ENSMUST00000128380 N/A N/A N/A N/A N/A 1.261±0.00 N/A N/A 2.017±0.00 N/A N/A N/A N/A 0.733±0.03
ENSMUST00000128544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151469 N/A 82.418±35.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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