C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 346
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021481 Zfp346 10090 + 13:55105311-55134825 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021937 Zfp346-001 55105327-55134825 protein_coding
  ENSMUST00000159147 Zfp346-002 55105333-55132740 protein_coding
  ENSMUST00000159278 Zfp346-004 55105332-55132705 protein_coding
  ENSMUST00000160310 Zfp346-010 55122016-55132356 retained_intron
  ENSMUST00000160660 Zfp346-008 55105337-55132496 nonsense_mediated_decay
  ENSMUST00000161018 Zfp346-006 55105311-55122478 nonsense_mediated_decay
  ENSMUST00000161077 Zfp346-009 55105399-55132375 protein_coding
  ENSMUST00000161315 Zfp346-007 55105314-55132387 protein_coding
  ENSMUST00000161551 Zfp346-013 55105333-55130600 nonsense_mediated_decay
  ENSMUST00000162288 Zfp346-005 55113091-55113973 retained_intron
  ENSMUST00000162428 Zfp346-012 55105339-55132588 nonsense_mediated_decay
  ENSMUST00000162476 Zfp346-003 55105333-55132755 nonsense_mediated_decay
  ENSMUST00000162653 Zfp346-011 55130224-55132630 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021937ENSMUST00000161315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021937 2.892±1.14 3.700±1.21 9.203±0.12 6.807±3.11 1.177±0.43 1.048±0.19 2.501±0.53 1.816±0.53 2.870±2.69 2.320±0.38 3.145±0.49 4.406±1.26 3.092±1.28 5.580±2.43
ENSMUST00000161315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.504±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OX CIL_0000OX_0004 CGP 13:55027880-55134825
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003725 ISS double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0019899 IEA enzyme binding
GO:0043065 IMP positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036573 CU914629.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000060695 znf346 zinc finger protein 346 protein_coding Danio_rerio
ENSG00000113761 ZNF346 zinc finger protein 346 protein_coding Homo_sapiens

Loading