C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 346
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021937 Zfp346-001 ENSMUSG00000021481 10090 + 13:55105327-55134825 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021937
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021937 2.892±1.14 3.700±1.21 9.203±0.12 6.807±3.11 1.177±0.43 1.048±0.19 2.501±0.53 1.816±0.53 2.870±2.69 2.320±0.38 3.145±0.49 4.406±1.26 3.092±1.28 5.580±2.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OX CIL_0000OX_0004 CGP 13:55027880-55134825
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 ISS double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0019899 IEA enzyme binding
GO:0043065 IMP positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358149 ZNF346-001 protein_coding Homo_sapiens 0 1092
ENST00000503039 ZNF346-008 protein_coding Homo_sapiens 0 939
ENST00000503425 ZNF346-004 protein_coding Homo_sapiens 0 665
ENST00000504600 ZNF346-010 retained_intron Homo_sapiens 0 420
ENST00000506693 ZNF346-002 protein_coding Homo_sapiens 0 448
ENST00000508155 ZNF346-006 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000510933 ZNF346-009 retained_intron Homo_sapiens 0 300
ENST00000511834 ZNF346-005 protein_coding Homo_sapiens 0 647
ENST00000513587 ZNF346-007 nonsense_mediated_decay Homo_sapiens 0 422

Loading