C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 346
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113761 ZNF346 9606 + 5:177022696-177081189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358149 ZNF346-001 177022696-177065985 protein_coding
  ENST00000503039 ZNF346-008 177022735-177081189 protein_coding
  ENST00000503425 ZNF346-004 177022704-177064966 protein_coding
  ENST00000504600 ZNF346-010 177044327-177050892 retained_intron
  ENST00000506693 ZNF346-002 177022696-177065241 protein_coding
  ENST00000508155 ZNF346-006 177022716-177065458 nonsense_mediated_decay
  ENST00000510933 ZNF346-009 177022904-177042249 retained_intron
  ENST00000511834 ZNF346-005 177022732-177065965 protein_coding
  ENST00000512315 ZNF346-003 177022696-177080554 protein_coding
  ENST00000513587 ZNF346-007 177022735-177065018 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358149ENST00000503039ENST00000503425ENST00000504600ENST00000506693ENST00000508155ENST00000510933ENST00000511834ENST00000513587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358149 2.077±0.00 2.641±0.00 1.146±0.00 2.079±0.45 0.981±0.00 2.350±0.00 0.800±0.33 1.777±0.00 1.028±0.03 1.783±0.00 0.865±0.00 2.021±1.46 2.086±0.11 3.380±0.21
ENST00000503039 0.334±0.00 1.036±0.00 N/A 0.622±0.00 N/A N/A N/A N/A N/A N/A N/A 1.019±0.00 0.410±0.00 N/A
ENST00000503425 N/A N/A N/A N/A N/A 0.439±0.00 0.759±0.00 N/A N/A 0.561±0.00 0.799±0.00 0.371±0.00 1.911±0.00 N/A
ENST00000504600 N/A N/A N/A N/A N/A N/A N/A 1.588±0.00 N/A N/A 3.072±0.00 N/A N/A N/A
ENST00000506693 N/A N/A N/A N/A N/A 0.456±0.00 0.671±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000508155 0.508±0.00 N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510933 N/A N/A N/A N/A N/A N/A 0.871±0.00 1.278±0.00 N/A N/A 1.272±0.00 1.272±0.00 N/A N/A
ENST00000511834 N/A N/A N/A 0.649±0.01 N/A N/A N/A 0.876±0.35 N/A N/A N/A 1.059±0.41 N/A 1.850±0.03
ENST00000513587 N/A N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A 0.672±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OX CIL_0000OX_0003 CGP 5:176905005-177081189
CIL_0000OR CIL_0000OR_0002 CGP 5:177022696-177098144

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003725 IDA double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0019899 IPI enzyme binding
GO:0043065 IEA positive regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036573 CU914629.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000060695 znf346 zinc finger protein 346 protein_coding Danio_rerio
ENSMUSG00000021481 Zfp346 zinc finger protein 346 protein_coding Mus_musculus

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