C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP/GTP binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021557 Agtpbp1 10090 - 13:59449537-59585227 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022040 Agtpbp1-001 59449538-59557289 protein_coding
  ENSMUST00000109830 Agtpbp1-018 59493400-59557286 protein_coding
  ENSMUST00000151827 Agtpbp1-022 59511358-59514154 processed_transcript
  ENSMUST00000163149 Agtpbp1-013 59449540-59533190 protein_coding
  ENSMUST00000163284 Agtpbp1-006 59580176-59585227 processed_transcript
  ENSMUST00000164215 Agtpbp1-002 59453850-59544439 protein_coding
  ENSMUST00000165370 Agtpbp1-020 59528471-59557279 protein_coding
  ENSMUST00000165477 Agtpbp1-009 59480581-59557295 nonsense_mediated_decay
  ENSMUST00000165598 Agtpbp1-016 59517682-59557289 nonsense_mediated_decay
  ENSMUST00000165851 Agtpbp1-017 59514166-59534072 processed_transcript
  ENSMUST00000166276 Agtpbp1-015 59449537-59450228 processed_transcript
  ENSMUST00000166585 Agtpbp1-014 59531182-59557347 protein_coding
  ENSMUST00000167096 Agtpbp1-005 59531905-59557300 protein_coding
  ENSMUST00000167593 Agtpbp1-008 59512384-59557311 nonsense_mediated_decay
  ENSMUST00000168141 Agtpbp1-019 59473697-59481338 processed_transcript
  ENSMUST00000168821 Agtpbp1-004 59531905-59558894 protein_coding
  ENSMUST00000169434 Agtpbp1-021 59536251-59557037 protein_coding
  ENSMUST00000169745 Agtpbp1-010 59449880-59556922 nonsense_mediated_decay
  ENSMUST00000170378 Agtpbp1-007 59531913-59556919 protein_coding
  ENSMUST00000170520 Agtpbp1-012 59532043-59585211 protein_coding
  ENSMUST00000170555 Agtpbp1-011 59449880-59557286 nonsense_mediated_decay
  ENSMUST00000171606 Agtpbp1-003 59493410-59557294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022040ENSMUST00000163149ENSMUST00000164215ENSMUST00000169745ENSMUST00000170555ENSMUST00000171606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022040 3.522±0.61 1.255±0.00 7.146±1.09 7.471±0.03 1.577±0.24 0.639±0.22 7.682±2.00 2.425±0.48 1.056±0.44 3.578±0.84 8.270±1.08 1.995±1.26 2.095±0.16 22.991±1.48
ENSMUST00000163149 N/A N/A N/A 17.246±0.00 N/A N/A N/A N/A N/A N/A N/A 2.568±0.00 3.142±1.19 N/A
ENSMUST00000164215 2.685±0.34 N/A 1.760±0.00 7.598±4.20 1.061±0.21 N/A 4.602±0.54 1.456±0.05 0.766±0.54 1.513±0.31 1.317±0.00 1.547±0.32 1.552±0.26 14.574±1.10
ENSMUST00000169745 N/A N/A N/A 35.694±0.00 N/A 0.634±0.00 N/A N/A 1.034±0.33 N/A 2.122±0.42 2.945±2.77 2.913±1.75 35.845±0.00
ENSMUST00000170555 1.314±0.00 0.467±0.00 N/A N/A 1.209±0.00 0.314±0.06 N/A 0.887±0.00 0.190±0.00 1.288±0.00 N/A 0.910±0.17 N/A N/A
ENSMUST00000171606 N/A 0.988±0.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.998±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007E CIL_00007E_0003 CGP 13:58806596-59585227
CIL_0006G3 CIL_0006G3_0002 CGP 13:59449537-59634798

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001754 IMP eye photoreceptor cell differentiation
GO:0004181 IDA metallocarboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006508 IEA proteolysis
GO:0007005 IMP mitochondrion organization
GO:0007628 IMP adult walking behavior
GO:0008219 IEA cell death
GO:0008233 TAS peptidase activity
GO:0008270 IEA zinc ion binding
GO:0015631 IDA tubulin binding
GO:0021549 IMP cerebellum development
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0021702 IMP cerebellar Purkinje cell differentiation
GO:0021772 IMP olfactory bulb development
GO:0035609 IDA C-terminal protein deglutamylation
GO:0035610 IDA protein side chain deglutamylation
GO:0042133 IMP neurotransmitter metabolic process
GO:0050905 IGI neuromuscular process
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006021 agtpbp1 ATP/GTP binding protein 1 protein_coding Danio_rerio
ENSG00000135049 AGTPBP1 ATP/GTP binding protein 1 protein_coding Homo_sapiens

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