C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169745 Agtpbp1-010 ENSMUSG00000021557 10090 - 13:59449880-59556922 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverMuscleOvaryPlacentaTestisENSMUST00000169745
Transcript ID Brain Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000169745 35.694±0.00 0.634±0.00 1.034±0.33 2.122±0.42 2.945±2.77 2.913±1.75 35.845±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007E CIL_00007E_0003 CGP 13:58806596-59585227
CIL_0006G3 CIL_0006G3_0002 CGP 13:59449537-59634798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007628 IMP adult walking behavior
GO:0021549 IMP cerebellum development
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0021702 IMP cerebellar Purkinje cell differentiation
GO:0042133 IMP neurotransmitter metabolic process
GO:0050905 IGI neuromuscular process
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337006 AGTPBP1-201 protein_coding Homo_sapiens 0 2466
ENST00000357081 AGTPBP1-004 protein_coding Homo_sapiens 0 2466
ENST00000376083 AGTPBP1-005 protein_coding Homo_sapiens 0 2466
ENST00000489265 AGTPBP1-006 processed_transcript Homo_sapiens 0 333

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