C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170555 Agtpbp1-011 ENSMUSG00000021557 10090 - 13:59449880-59557286 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000170555
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000170555 1.314±0.00 0.467±0.00 1.209±0.00 0.314±0.06 0.887±0.00 0.190±0.00 1.288±0.00 0.910±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007E CIL_00007E_0003 CGP 13:58806596-59585227
CIL_0006G3 CIL_0006G3_0002 CGP 13:59449537-59634798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001754 IMP eye photoreceptor cell differentiation
GO:0004181 IDA metallocarboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006508 IEA proteolysis
GO:0007005 IMP mitochondrion organization
GO:0007628 IMP adult walking behavior
GO:0008219 IEA cell death
GO:0008233 TAS peptidase activity
GO:0008270 IEA zinc ion binding
GO:0015631 IDA tubulin binding
GO:0021549 IMP cerebellum development
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0021702 IMP cerebellar Purkinje cell differentiation
GO:0021772 IMP olfactory bulb development
GO:0035609 IDA C-terminal protein deglutamylation
GO:0035610 IDA protein side chain deglutamylation
GO:0042133 IMP neurotransmitter metabolic process
GO:0050905 IGI neuromuscular process
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337006 AGTPBP1-201 protein_coding Homo_sapiens 0 1509
ENST00000357081 AGTPBP1-004 protein_coding Homo_sapiens 0 1598
ENST00000376083 AGTPBP1-005 protein_coding Homo_sapiens 0 1094
ENST00000491784 AGTPBP1-003 processed_transcript Homo_sapiens 0 719

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