C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022040 Agtpbp1-001 ENSMUSG00000021557 10090 - 13:59449538-59557289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022040 3.522±0.61 1.255±0.00 7.146±1.09 7.471±0.03 1.577±0.24 0.639±0.22 7.682±2.00 2.425±0.48 1.056±0.44 3.578±0.84 8.270±1.08 1.995±1.26 2.095±0.16 22.991±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007E CIL_00007E_0003 CGP 13:58806596-59585227
CIL_0006G3 CIL_0006G3_0002 CGP 13:59449537-59634798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001754 IMP eye photoreceptor cell differentiation
GO:0004181 IDA metallocarboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006508 IEA proteolysis
GO:0007005 IMP mitochondrion organization
GO:0007628 IMP adult walking behavior
GO:0008219 IEA cell death
GO:0008233 TAS peptidase activity
GO:0008270 IEA zinc ion binding
GO:0015631 IDA tubulin binding
GO:0021549 IMP cerebellum development
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0021702 IMP cerebellar Purkinje cell differentiation
GO:0021772 IMP olfactory bulb development
GO:0035609 IDA C-terminal protein deglutamylation
GO:0035610 IDA protein side chain deglutamylation
GO:0042133 IMP neurotransmitter metabolic process
GO:0050905 IGI neuromuscular process
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337006 AGTPBP1-201 protein_coding Homo_sapiens 0 2505
ENST00000357081 AGTPBP1-004 protein_coding Homo_sapiens 0 2505
ENST00000376083 AGTPBP1-005 protein_coding Homo_sapiens 0 2505
ENST00000489265 AGTPBP1-006 processed_transcript Homo_sapiens 0 333
ENST00000491784 AGTPBP1-003 processed_transcript Homo_sapiens 0 719

Loading