C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6 (neurotransmitter transporter), member 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021565 Slc6a19 10090 - 13:73679745-73704865 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022048 Slc6a19-001 73679745-73700780 protein_coding
  ENSMUST00000120322 Slc6a19-004 73679747-73692636 processed_transcript
  ENSMUST00000123997 Slc6a19-008 73689087-73704865 processed_transcript
  ENSMUST00000124406 Slc6a19-005 73689738-73700681 nonsense_mediated_decay
  ENSMUST00000132085 Slc6a19-003 73679747-73700695 retained_intron
  ENSMUST00000139087 Slc6a19-006 73689570-73692379 processed_transcript
  ENSMUST00000140878 Slc6a19-007 73689776-73692254 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022048ENSMUST00000120322ENSMUST00000123997ENSMUST00000132085ENSMUST00000139087ENSMUST00000140878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022048 N/A N/A N/A N/A N/A 0.406±0.15 N/A 196.688±4.30 N/A 1.663±1.14 N/A N/A 0.199±0.00 0.054±0.01
ENSMUST00000120322 0.061±0.02 0.051±0.01 0.025±0.01 0.050±0.03 0.364±0.15 0.516±0.19 0.028±0.01 N/A 0.283±0.23 0.031±0.00 0.035±0.02 0.134±0.09 0.365±0.23 0.039±0.00
ENSMUST00000123997 N/A 0.082±0.00 0.029±0.00 N/A 2.119±0.00 0.561±0.12 N/A 253.593±18.49 0.143±0.07 0.081±0.04 N/A 0.311±0.10 N/A N/A
ENSMUST00000132085 N/A 0.086±0.00 0.009±0.00 N/A 0.144±0.00 0.121±0.01 N/A N/A 0.058±0.00 N/A N/A 0.059±0.01 0.172±0.09 N/A
ENSMUST00000139087 N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSMUST00000140878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 0.341±0.00 N/A 0.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JA CIL_0000JA_0002 CGP 13:73661750-73704865

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005515 IPI protein binding
GO:0005886 ISS plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0006836 IEA neurotransmitter transport
GO:0007584 IEA response to nutrient
GO:0015175 IDA neutral amino acid transmembrane transporter activity
GO:0015804 IDA neutral amino acid transport
GO:0016021 IEA integral component of membrane
GO:0031526 IDA brush border membrane
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018621 slc6a19a solute carrier family 6 (neurotransmitter transporter), member 19a protein_coding Danio_rerio
ENSDARG00000056719 slc6a19b solute carrier family 6 (neurotransmitter transporter), member 19b protein_coding Danio_rerio
ENSDARG00000091560 CU856173.1 Transporter protein_coding Danio_rerio
ENSG00000174358 SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 protein_coding Homo_sapiens

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