C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter), member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124406 Slc6a19-005 ENSMUSG00000021565 10090 - 13:73689738-73700681 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JA CIL_0000JA_0002 CGP 13:73661750-73704865

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005515 IPI protein binding
GO:0005886 ISS plasma membrane
GO:0006836 IEA neurotransmitter transport
GO:0015175 IDA neutral amino acid transmembrane transporter activity
GO:0015804 IDA neutral amino acid transport
GO:0016021 IEA integral component of membrane
GO:0031526 IDA brush border membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121462 CU856173.1-201 protein_coding Danio_rerio 2e-33 147
ENSDART00000025146 slc6a19a-001 protein_coding Danio_rerio 4e-30 135
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 0.00002 57
ENST00000254488 SLC6A11-001 protein_coding Homo_sapiens 0.0000005 62
ENST00000431994 SLC6A10P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.000000005 68
ENST00000454147 SLC6A11-002 protein_coding Homo_sapiens 0.0000003 62
ENST00000476466 SLC6A8-004 processed_transcript Homo_sapiens 0.000002 57
ENST00000613216 AC136616.1-201 protein_coding Homo_sapiens 0.0000004 62

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