C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOL1/NOP2/Sun domain family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021595 Nsun2 10090 + 13:69533746-69635780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022087 Nsun2-002 69612244-69635780 protein_coding
  ENSMUST00000109699 Nsun2-001 69612016-69634334 protein_coding
  ENSMUST00000127854 Nsun2-003 69612603-69619593 processed_transcript
  ENSMUST00000136891 Nsun2-007 69630740-69631668 retained_intron
  ENSMUST00000136932 Nsun2-004 69621311-69629629 retained_intron
  ENSMUST00000143716 Nsun2-005 69533746-69615468 protein_coding
  ENSMUST00000148115 Nsun2-006 69533768-69605941 processed_transcript
  ENSMUST00000176485 Nsun2-008 69612049-69634046 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022087ENSMUST00000109699ENSMUST00000127854ENSMUST00000176485
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022087 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.301±0.00 N/A N/A N/A
ENSMUST00000109699 10.575±5.18 23.111±0.57 16.208±1.08 11.303±1.56 N/A 6.545±2.40 6.747±2.07 24.773±16.70 8.416±1.20 9.364±1.68 30.201±3.55 33.205±14.84 31.283±10.18
ENSMUST00000127854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.209±1.31
ENSMUST00000176485 9.300±0.00 N/A 22.876±0.00 N/A 7.490±0.73 N/A N/A N/A 4.263±0.00 N/A 40.932±0.00 51.832±41.55 22.313±17.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EG CIL_0001EG_0002 CGP 13:68620043-69533839
CIL_00048P CIL_00048P_0002 CGP 13:69533746-69635780

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007067 IEA mitotic nuclear division
GO:0016428 IEA tRNA (cytosine-5-)-methyltransferase activity
GO:0030488 IEA tRNA methylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056665 nsun2 NOL1/NOP2/Sun domain family, member 2 protein_coding Danio_rerio
ENSG00000037474 NSUN2 NOP2/Sun RNA methyltransferase family, member 2 protein_coding Homo_sapiens

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