C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000037474-ENSG00000145545 CGP 9606 5:6599239-6669562
GeneTranscriptPositionBiotype
ENSG00000037474 (NSUN2)
NOP2/Sun RNA methyltransferase family, member 2 		ENST00000264670 (NSUN2-001) 6599239-6633291 protein_coding
ENST00000502932 (NSUN2-009) 6603869-6604708 retained_intron
ENST00000504374 (NSUN2-005) 6599240-6633291 nonsense_mediated_decay
ENST00000505264 (NSUN2-007) 6620116-6625638 processed_transcript
ENST00000505892 (NSUN2-003) 6599241-6621489 retained_intron
ENST00000506139 (NSUN2-004) 6599569-6633042 protein_coding
ENST00000507888 (NSUN2-008) 6604801-6606926 retained_intron
ENST00000513888 (NSUN2-002) 6599400-6604882 retained_intron
ENST00000514127 (NSUN2-006) 6600030-6607257 nonsense_mediated_decay
ENSG00000145545 (SRD5A1)
steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) 		ENST00000274192 (SRD5A1-001) 6633343-6669562 protein_coding
ENST00000504286 (SRD5A1-005) 6633456-6653527 processed_transcript
ENST00000510531 (SRD5A1-003) 6633427-6668849 nonsense_mediated_decay
ENST00000513117 (SRD5A1-004) 6633427-6668972 nonsense_mediated_decay
CIL_00048P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021595-ENSMUSG00000021595 CGP 10090 13:69533746-69635780
GeneTranscriptPositionBiotype
ENSMUSG00000021595 (Nsun2)
NOL1/NOP2/Sun domain family member 2 		ENSMUST00000022087 (Nsun2-002) 69612244-69635780 protein_coding
ENSMUST00000109699 (Nsun2-001) 69612016-69634334 protein_coding
ENSMUST00000127854 (Nsun2-003) 69612603-69619593 processed_transcript
ENSMUST00000136891 (Nsun2-007) 69630740-69631668 retained_intron
ENSMUST00000136932 (Nsun2-004) 69621311-69629629 retained_intron
ENSMUST00000143716 (Nsun2-005) 69533746-69615468 protein_coding
ENSMUST00000148115 (Nsun2-006) 69533768-69605941 processed_transcript
ENSMUST00000176485 (Nsun2-008) 69612049-69634046 protein_coding
ENSMUSG00000034575 (Papd7)
PAP associated domain containing 7 		ENSMUST00000044081 (Papd7-001) 69497959-69533839 protein_coding
ENSMUSG00000051805 (A530095I07Rik)
RIKEN cDNA A530095I07 gene 		ENSMUST00000070942 (A530095I07Rik-001) 69543046-69544023 antisense
ENSMUSG00000091133 (Gm17108)
predicted gene 17108 		ENSMUST00000168625 (Gm17108-001) 69610498-69614901 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048P_0001ENSG00000037474ENST00000264670ENST00000502932ENST00000504374ENST00000505264ENST00000505892ENST00000506139ENST00000507888ENST00000513888ENST00000514127ENSG00000145545ENST00000274192ENST00000504286ENST00000510531ENST00000513117CIL_00048P_0002ENSMUSG00000021595ENSMUST00000022087ENSMUST00000109699ENSMUST00000127854ENSMUST00000136891ENSMUST00000136932ENSMUST00000143716ENSMUST00000148115ENSMUST00000176485ENSMUSG00000034575ENSMUST00000044081ENSMUSG00000051805ENSMUST00000070942ENSMUSG00000091133ENSMUST00000168625
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048P_0001ENSG00000037474ENST00000264670ENST00000504374ENST00000505892ENST00000506139ENST00000513888ENSG00000145545ENST00000274192ENST00000510531ENST00000513117CIL_00048P_0002ENSMUSG00000021595ENSMUST00000022087ENSMUST00000109699ENSMUST00000127854ENSMUST00000176485ENSMUSG00000034575ENSMUST00000044081ENSMUSG00000051805ENSMUST00000070942ENSMUSG00000091133ENSMUST00000168625
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000037474 ENST00000264670 3.295±0.00 6.409±0.00 1.142±0.00 3.164±0.24 4.438±0.50 1.939±0.00 6.535±0.00 4.274±2.18 5.424±1.97 1.353±0.00 3.814±2.26 8.608±1.41 8.569±1.15 7.311±0.00
ENST00000502932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504374 N/A N/A 0.513±0.00 2.061±0.00 N/A 1.120±0.00 2.099±0.00 N/A N/A N/A N/A 22.606±0.00 7.872±0.00 13.249±0.00
ENST00000505264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505892 N/A N/A 0.430±0.00 N/A N/A 1.563±0.00 0.492±0.00 1.288±0.00 0.741±0.00 1.782±0.00 N/A N/A N/A N/A
ENST00000506139 4.924±0.00 7.991±0.00 N/A N/A 3.875±0.00 2.743±0.00 3.750±0.00 3.613±0.00 2.420±0.00 1.591±0.01 3.953±2.75 16.058±15.20 5.973±5.85 13.166±10.32
ENST00000507888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513888 N/A N/A N/A 2.747±0.00 3.826±0.00 1.939±0.00 N/A N/A 3.465±0.00 2.554±0.00 N/A 8.026±0.00 N/A N/A
ENST00000514127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145545 ENST00000274192 0.685±0.00 0.847±0.00 N/A 2.928±0.03 1.667±0.13 1.027±0.40 0.264±0.14 5.333±2.71 3.252±2.66 0.428±0.00 0.089±0.00 3.631±0.96 0.718±0.04 1.757±0.03
ENST00000504286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510531 N/A N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A
ENST00000513117 N/A N/A N/A N/A N/A N/A N/A N/A 1.991±0.00 0.963±0.00 0.171±0.00 N/A 0.178±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021595 ENSMUST00000022087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.301±0.00 N/A N/A N/A
ENSMUST00000109699 10.575±5.18 N/A 23.111±0.57 16.208±1.08 11.303±1.56 N/A 6.545±2.40 6.747±2.07 24.773±16.70 8.416±1.20 9.364±1.68 30.201±3.55 33.205±14.84 31.283±10.18
ENSMUST00000127854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.209±1.31
ENSMUST00000136891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176485 9.300±0.00 N/A N/A 22.876±0.00 N/A 7.490±0.73 N/A N/A N/A 4.263±0.00 N/A 40.932±0.00 51.832±41.55 22.313±17.11
ENSMUSG00000034575 ENSMUST00000044081 8.505±3.52 9.389±3.07 7.967±0.18 12.864±2.72 7.918±1.83 8.329±1.64 4.171±0.52 7.564±1.28 7.568±1.20 6.884±0.89 2.229±0.23 15.492±5.05 9.471±0.74 N/A
ENSMUSG00000051805 ENSMUST00000070942 0.691±0.65 0.199±0.04 0.825±0.00 0.126±0.01 N/A 0.343±0.10 0.358±0.06 0.129±0.06 0.391±0.22 0.101±0.04 0.155±0.04 0.450±0.24 0.204±0.15 0.227±0.09
ENSMUSG00000091133 ENSMUST00000168625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.836±1.19

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