C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021738 Atxn7 10090 + 14:14012491-14107296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022257 Atxn7-201 14012491-14107296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022257 4.667±1.47 1.850±0.91 6.730±0.20 3.936±0.77 3.342±1.20 4.505±0.53 2.373±0.08 3.735±1.09 2.701±0.90 7.422±1.34 1.986±0.50 5.205±1.75 3.130±0.89 3.038±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ES CIL_0008ES_0002 VISTA 14:13470324-14071435
CIL_00078B CIL_00078B_0002 CGP 14:13949014-14107296
CIL_00079H CIL_00079H_0002 CGP 14:14012491-14120984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0015630 IEA microtubule cytoskeleton
GO:0016578 IEA histone deubiquitination
GO:0042326 IMP negative regulation of phosphorylation
GO:0043569 IMP negative regulation of insulin-like growth factor receptor signaling pathway
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074804 ataxin 7 protein_coding Danio_rerio
ENSG00000163635 ATXN7 ataxin 7 protein_coding Homo_sapiens

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