C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00078B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163634-ENSG00000163635 CGP 9606 3:63833870-64003462
GeneTranscriptPositionBiotype
ENSG00000163632 (C3orf49)
chromosome 3 open reading frame 49 		ENST00000295896 (C3orf49-001) 63819362-63848636 protein_coding
ENST00000491896 (C3orf49-002) 63823500-63832106 retained_intron
ENST00000616659 (C3orf49-201) 63819472-63833637 protein_coding
ENSG00000163634 (THOC7)
THO complex 7 homolog (Drosophila) 		ENST00000295899 (THOC7-001) 63833870-63863903 protein_coding
ENST00000464327 (THOC7-004) 63837992-63863799 protein_coding
ENST00000469153 (THOC7-006) 63835165-63839773 nonsense_mediated_decay
ENST00000469584 (THOC7-002) 63833871-63863868 protein_coding
ENST00000473141 (THOC7-007) 63835154-63854742 processed_transcript
ENST00000487570 (THOC7-005) 63838101-63839779 retained_intron
ENST00000498422 (THOC7-003) 63835327-63863786 processed_transcript
ENSG00000163635 (ATXN7)
ataxin 7 		ENST00000295900 (ATXN7-001) 63864560-64003462 protein_coding
ENST00000466529 (ATXN7-007) 63982187-63988474 retained_intron
ENST00000472569 (ATXN7-009) 63982891-63988463 retained_intron
ENST00000474112 (ATXN7-003) 63864557-63996636 retained_intron
ENST00000474513 (ATXN7-002) 63864557-63912675 protein_coding
ENST00000475897 (ATXN7-005) 63967807-63980663 retained_intron
ENST00000477516 (ATXN7-008) 63990510-63995877 retained_intron
ENST00000484332 (ATXN7-006) 63967744-63999796 protein_coding
ENST00000484668 (ATXN7-010) 63988199-63990985 retained_intron
ENST00000487717 (ATXN7-004) 63911929-64000207 protein_coding
ENST00000488239 (ATXN7-011) 63968369-63982423 processed_transcript
ENST00000522345 (ATXN7-013) 63996310-63999554 protein_coding
ENST00000538065 (ATXN7-201) 63898399-64003453 protein_coding
ENSG00000240549 (THOC7-AS1)
THOC7 antisense RNA 1 		ENST00000468961 (THOC7-AS1-001) 63860645-63861819 antisense
CIL_00078B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053453-ENSMUSG00000021738 CGP 10090 14:13949014-14107296
GeneTranscriptPositionBiotype
ENSMUSG00000021738 (Atxn7)
ataxin 7 		ENSMUST00000022257 (Atxn7-201) 14012491-14107296 protein_coding
ENSMUSG00000053453 (Thoc7)
THO complex 7 homolog (Drosophila) 		ENSMUST00000065865 (Thoc7-201) 13949014-13961225 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078B_0001ENSG00000163632ENST00000295896ENST00000491896ENST00000616659ENSG00000163634ENST00000295899ENST00000464327ENST00000469153ENST00000469584ENST00000473141ENST00000487570ENST00000498422ENSG00000163635ENST00000295900ENST00000466529ENST00000472569ENST00000474112ENST00000474513ENST00000475897ENST00000477516ENST00000484332ENST00000484668ENST00000487717ENST00000488239ENST00000522345ENST00000538065ENSG00000240549ENST00000468961CIL_00078B_0002ENSMUSG00000021738ENSMUST00000022257ENSMUSG00000053453ENSMUST00000065865
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078B_0001ENSG00000163632ENST00000295896ENST00000491896ENST00000616659ENSG00000163634ENST00000295899ENST00000469153ENST00000469584ENST00000473141ENST00000498422ENSG00000163635ENST00000295900ENST00000466529ENST00000474112ENST00000487717ENST00000538065ENSG00000240549ENST00000468961CIL_00078B_0002ENSMUSG00000021738ENSMUST00000022257ENSMUSG00000053453ENSMUST00000065865
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163632 ENST00000295896 N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A 0.034±0.00 N/A 0.027±0.01 N/A 0.061±0.00
ENST00000491896 0.017±0.00 0.184±0.00 0.072±0.00 0.865±0.19 0.183±0.04 0.131±0.00 0.126±0.00 0.205±0.00 0.129±0.07 0.470±0.00 N/A 0.042±0.00 N/A 0.211±0.03
ENST00000616659 N/A 0.089±0.00 N/A 0.243±0.00 0.021±0.00 N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A 0.194±0.03
ENSG00000163634 ENST00000295899 10.844±0.00 19.224±0.00 N/A 21.544±2.30 13.596±2.38 13.088±4.59 13.820±7.00 11.556±8.70 10.056±4.39 14.455±6.35 11.608±6.42 16.465±6.80 18.504±2.66 17.926±3.46
ENST00000464327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.437±0.00 N/A N/A N/A
ENST00000469584 13.266±0.00 13.731±0.00 N/A 9.281±0.00 8.653±6.16 25.672±0.00 6.127±0.00 7.362±6.22 4.404±0.00 1.244±0.00 0.720±0.00 17.438±2.63 16.437±10.18 12.579±0.43
ENST00000473141 N/A N/A N/A N/A N/A 2.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498422 N/A N/A 2.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163635 ENST00000295900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.630±0.18 N/A 0.889±0.00
ENST00000466529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.601±0.00
ENST00000472569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474112 N/A N/A N/A 0.988±0.00 N/A N/A N/A N/A N/A N/A N/A 0.765±0.00 0.970±0.00 2.322±0.00
ENST00000474513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487717 N/A N/A 2.263±0.00 N/A N/A N/A 1.073±0.00 2.348±0.00 1.406±0.00 1.449±0.00 N/A 2.539±0.00 0.766±0.02 N/A
ENST00000488239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538065 2.973±0.00 1.758±0.00 N/A 1.020±0.55 1.850±0.00 0.978±0.00 0.914±0.40 1.539±0.00 0.463±0.04 1.432±0.00 1.870±0.00 1.453±0.85 0.304±0.07 3.117±0.00
ENSG00000240549 ENST00000468961 0.123±0.00 0.350±0.00 0.215±0.00 0.053±0.00 0.254±0.00 0.060±0.02 0.076±0.03 0.279±0.00 0.803±0.00 N/A N/A 0.196±0.15 1.537±0.00 0.304±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021738 ENSMUST00000022257 4.667±1.47 1.850±0.91 6.730±0.20 3.936±0.77 3.342±1.20 4.505±0.53 2.373±0.08 3.735±1.09 2.701±0.90 7.422±1.34 1.986±0.50 5.205±1.75 3.130±0.89 3.038±0.89
ENSMUSG00000053453 ENSMUST00000065865 11.742±0.74 2.687±0.70 38.393±0.46 27.713±14.43 10.541±3.38 7.485±2.02 14.331±1.37 15.823±3.11 24.615±19.96 8.132±2.03 41.556±4.32 15.290±15.09 24.223±7.06 19.752±1.23

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