C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022451 Capn7-001 ENSMUSG00000021893 10090 + 14:31336638-31371984 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022451
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022451 10.103±1.36 15.300±8.30 14.079±0.80 19.547±9.15 10.493±3.24 9.402±1.60 9.628±0.63 10.028±0.89 8.884±3.07 10.569±0.78 10.307±1.29 11.631±3.74 9.018±1.87 3.293±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_0002EF CIL_0002EF_0003 CGP 14:31336638-31436078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0006508 IBA proteolysis
GO:0010634 IEA positive regulation of epithelial cell migration
GO:0070062 IEA extracellular vesicular exosome
GO:0090541 IEA MIT domain binding
GO:0097264 IEA self proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253693 CAPN7-001 protein_coding Homo_sapiens 0 3249
ENST00000415565 CAPN7-006 protein_coding Homo_sapiens 0 671
ENST00000443567 CAPN7-007 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000457023 CAPN7-005 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000463417 CAPN7-003 retained_intron Homo_sapiens 0 660
ENST00000472400 CAPN7-008 retained_intron Homo_sapiens 0 503

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