C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leukocyte cell derived chemotaxin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022025 Lect1 10090 - 14:79637690-79662170 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022603 Lect1-001 79637693-79662170 protein_coding
  ENSMUST00000165204 Lect1-004 79637816-79642195 retained_intron
  ENSMUST00000165835 Lect1-002 79637690-79662084 protein_coding
  ENSMUST00000167524 Lect1-003 79641987-79645658 retained_intron
  ENSMUST00000172331 Lect1-005 79641477-79645510 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022603ENSMUST00000165204ENSMUST00000165835ENSMUST00000167524ENSMUST00000172331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022603 0.602±0.34 N/A 0.472±0.10 0.536±0.07 0.337±0.10 N/A 0.356±0.29 0.047±0.01 0.151±0.14 0.141±0.03 0.048±0.01 36.022±13.60 0.892±0.62 0.644±0.38
ENSMUST00000165204 N/A 0.137±0.00 N/A N/A 0.284±0.10 0.254±0.00 0.289±0.00 0.178±0.04 1.291±0.93 0.144±0.04 0.068±0.00 19.213±3.55 0.389±0.05 0.767±0.54
ENSMUST00000165835 N/A 0.136±0.00 0.190±0.02 0.501±0.38 0.203±0.04 0.060±0.00 0.107±0.00 0.057±0.04 0.254±0.21 0.117±0.00 0.032±0.00 47.682±26.05 1.781±1.81 0.729±0.64
ENSMUST00000167524 N/A N/A N/A N/A N/A N/A N/A 0.306±0.02 N/A 0.190±0.00 N/A N/A N/A N/A
ENSMUST00000172331 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.019±0.00 N/A 0.111±0.00 N/A N/A 0.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MD CIL_0000MD_0002 CGP 14:79587691-79662170
CIL_0000ME CIL_0000ME_0002 CGP 14:79637690-79771312

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001886 IDA endothelial cell morphogenesis
GO:0001937 IDA negative regulation of endothelial cell proliferation
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016021 IEA integral component of membrane
GO:0016525 IDA negative regulation of angiogenesis
GO:0030948 IMP negative regulation of vascular endothelial growth factor receptor signaling pathway
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013930 lect1 leukocyte cell derived chemotaxin 1 protein_coding Danio_rerio
ENSG00000136110 LECT1 leukocyte cell derived chemotaxin 1 protein_coding Homo_sapiens

Loading