C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ME_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136110-ENSG00000136099 CGP 9606 13:52703264-52848641
GeneTranscriptPositionBiotype
ENSG00000136099 (PCDH8)
protocadherin 8 		ENST00000338862 (PCDH8-002) 52843979-52848641 protein_coding
ENST00000377942 (PCDH8-001) 52842889-52848640 protein_coding
ENST00000613548 (PCDH8-005) 52844459-52845693 retained_intron
ENSG00000136110 (LECT1)
leukocyte cell derived chemotaxin 1 		ENST00000377962 (LECT1-001) 52703269-52739780 protein_coding
ENST00000431550 (LECT1-002) 52712716-52739352 protein_coding
ENST00000448904 (LECT1-003) 52703264-52739812 protein_coding
ENSG00000150276 (PPIAP26)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 26 		ENST00000377951 (PPIAP26-001) 52820497-52821018 processed_pseudogene
CIL_0000ME_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022025-ENSMUSG00000036422 CGP 10090 14:79637690-79771312
GeneTranscriptPositionBiotype
ENSMUSG00000022025 (Lect1)
leukocyte cell derived chemotaxin 1 		ENSMUST00000022603 (Lect1-001) 79637693-79662170 protein_coding
ENSMUST00000165204 (Lect1-004) 79637816-79642195 retained_intron
ENSMUST00000165835 (Lect1-002) 79637690-79662084 protein_coding
ENSMUST00000167524 (Lect1-003) 79641987-79645658 retained_intron
ENSMUST00000172331 (Lect1-005) 79641477-79645510 processed_transcript
ENSMUSG00000036422 (Pcdh8)
protocadherin 8 		ENSMUST00000039568 (Pcdh8-201) 79766772-79771312 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ME_0001ENSG00000136099ENST00000338862ENST00000377942ENST00000613548ENSG00000136110ENST00000377962ENST00000431550ENST00000448904ENSG00000150276ENST00000377951CIL_0000ME_0002ENSMUSG00000022025ENSMUST00000022603ENSMUST00000165204ENSMUST00000165835ENSMUST00000167524ENSMUST00000172331ENSMUSG00000036422ENSMUST00000039568
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ME_0001ENSG00000136099ENST00000338862ENST00000377942ENST00000613548ENSG00000136110ENST00000377962ENST00000431550ENST00000448904ENSG00000150276ENST00000377951CIL_0000ME_0002ENSMUSG00000022025ENSMUST00000022603ENSMUST00000165204ENSMUST00000165835ENSMUST00000167524ENSMUST00000172331ENSMUSG00000036422ENSMUST00000039568
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136099 ENST00000338862 N/A 0.027±0.00 N/A 2.534±0.69 0.034±0.00 0.087±0.00 N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.293±0.06
ENST00000377942 N/A N/A N/A 1.077±0.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613548 N/A N/A N/A 5.857±0.14 N/A 0.167±0.00 N/A N/A N/A N/A N/A 0.072±0.00 N/A 1.270±0.22
ENSG00000136110 ENST00000377962 0.008±0.00 0.030±0.00 N/A 0.439±0.00 0.007±0.00 N/A 0.026±0.02 0.092±0.00 N/A 0.132±0.00 N/A N/A 0.035±0.02 0.920±0.54
ENST00000431550 N/A 0.167±0.00 N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A N/A 0.060±0.02 0.043±0.00 N/A
ENST00000448904 0.002±0.00 N/A N/A N/A 0.003±0.00 N/A 0.004±0.00 N/A N/A N/A N/A N/A 0.010±0.00 N/A
ENSG00000150276 ENST00000377951 0.054±0.00 0.028±0.00 N/A 0.059±0.00 0.142±0.00 N/A N/A 0.084±0.00 N/A N/A 0.048±0.00 N/A N/A 0.116±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022025 ENSMUST00000022603 0.602±0.34 N/A 0.472±0.10 0.536±0.07 0.337±0.10 N/A 0.356±0.29 0.047±0.01 0.151±0.14 0.141±0.03 0.048±0.01 36.022±13.60 0.892±0.62 0.644±0.38
ENSMUST00000165204 N/A 0.137±0.00 N/A N/A 0.284±0.10 0.254±0.00 0.289±0.00 0.178±0.04 1.291±0.93 0.144±0.04 0.068±0.00 19.213±3.55 0.389±0.05 0.767±0.54
ENSMUST00000165835 N/A 0.136±0.00 0.190±0.02 0.501±0.38 0.203±0.04 0.060±0.00 0.107±0.00 0.057±0.04 0.254±0.21 0.117±0.00 0.032±0.00 47.682±26.05 1.781±1.81 0.729±0.64
ENSMUST00000167524 N/A N/A N/A N/A N/A N/A N/A 0.306±0.02 N/A 0.190±0.00 N/A N/A N/A N/A
ENSMUST00000172331 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.019±0.00 N/A 0.111±0.00 N/A N/A 0.613±0.00
ENSMUSG00000036422 ENSMUST00000039568 0.027±0.01 0.017±0.01 0.044±0.03 16.118±10.66 0.012±0.00 0.008±0.00 0.011±0.00 0.032±0.02 0.019±0.01 0.020±0.01 N/A 0.535±0.13 0.026±0.01 0.928±0.43

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