C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leukocyte cell derived chemotaxin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022603 Lect1-001 ENSMUSG00000022025 10090 - 14:79637693-79662170 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022603
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022603 0.602±0.34 0.472±0.10 0.536±0.07 0.337±0.10 0.356±0.29 0.047±0.01 0.151±0.14 0.141±0.03 0.048±0.01 36.022±13.60 0.892±0.62 0.644±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MD CIL_0000MD_0002 CGP 14:79587691-79662170
CIL_0000ME CIL_0000ME_0002 CGP 14:79637690-79771312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001886 IDA endothelial cell morphogenesis
GO:0001937 IDA negative regulation of endothelial cell proliferation
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016021 IEA integral component of membrane
GO:0016525 IDA negative regulation of angiogenesis
GO:0030948 IMP negative regulation of vascular endothelial growth factor receptor signaling pathway
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377962 LECT1-001 protein_coding Homo_sapiens 0 1110
ENST00000431550 LECT1-002 protein_coding Homo_sapiens 0 586
ENST00000448904 LECT1-003 protein_coding Homo_sapiens 0 1092

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