C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glypican 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022112 Gpc5 10090 + 14:115092215-116525179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022707 Gpc5-201 115092626-116524437 protein_coding
  ENSMUST00000175665 Gpc5-003 115092272-115417821 protein_coding
  ENSMUST00000176912 Gpc5-001 115092250-116525179 protein_coding
  ENSMUST00000176993 Gpc5-002 115092215-115134210 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000022707ENSMUST00000175665ENSMUST00000176912ENSMUST00000176993
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000022707 N/A N/A N/A 4.635±4.40 N/A 0.038±0.00 0.157±0.02 0.022±0.01 0.025±0.00 0.051±0.03 0.020±0.00 N/A
ENSMUST00000175665 N/A 1.028±0.24 N/A N/A 0.024±0.00 N/A 0.241±0.06 0.006±0.00 N/A N/A 0.011±0.00 0.053±0.01
ENSMUST00000176912 0.030±0.01 0.691±0.16 0.011±0.00 2.239±2.30 N/A N/A 0.122±0.02 0.010±0.00 N/A 0.019±0.00 0.024±0.00 0.123±0.02
ENSMUST00000176993 N/A 1.232±0.59 N/A N/A 0.030±0.00 0.092±0.00 0.332±0.31 0.055±0.06 0.034±0.00 0.082±0.01 0.036±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EC CIL_0002EC_0002 CGP 14:115092215-117979529

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005796 TAS Golgi lumen
GO:0005887 ISS integral component of plasma membrane
GO:0031225 IEA anchored component of membrane
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088858 GPC5 glypican 5 protein_coding Danio_rerio
ENSG00000179399 GPC5 glypican 5 protein_coding Homo_sapiens

Loading